RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 C7orf72A4D263 438 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 H0YC42 278 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 KIAA0513O60268 411 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 RCBTB2O95199 551 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 OPN1LWP04000 364 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 UQCRC1P31930 480 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 EIF1AXP47813 144 aaKnown RBP12.82□□□□□ -0.36
VAMP4-203ENST00000474047 ZNF136P52737 540 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-203ENST00000474047 DSTNP60981 165 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 RAC1P63000 192 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 GTDC1Q4AE62 458 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 OR2A2Q6IF42 318 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 FRRS1Q6ZNA5 592 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 LRRC74BQ6ZQY2 392 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 HMGN2P46Q86SG4 172 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 FBXO27Q8NI29 283 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 GPR119Q8TDV5 335 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 AURKBQ96GD4 344 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-203ENST00000474047 UCN2Q96RP3 112 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 SPOCK3Q9BQ16 436 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 THUMPD3Q9BV44 507 aaKnown RBP12.82□□□□□ -0.36
VAMP4-203ENST00000474047 SAP130Q9H0E3 1048 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 TMEM185BQ9H7F4 350 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 MTHFD2LQ9H903 347 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-203ENST00000474047 TMEM45AQ9NWC5 275 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 CALML5Q9NZT1 146 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 CLCF1Q9UBD9 225 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 KCNE5Q9UJ90 142 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 L3MBTL1Q9Y468 752 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 PCDHB14Q9Y5E9 798 aa12.82□□□□□ -0.36
VAMP4-203ENST00000474047 GPC6Q9Y625 555 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-203ENST00000474047 A0A096LPI6 279 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 CLIC1O00299 241 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
VAMP4-203ENST00000474047 ATP8B1O43520 1251 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 SYNGR4O95473 234 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 LINGO3P0C6S8 592 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 ETFAP13804 333 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 PGCP20142 388 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 KCNJ10P78508 379 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 FUT5Q11128 374 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 FOXF1Q12946 379 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 FUNDC1Q8IVP5 155 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 PEX5LQ8IYB4 626 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 GCNT2Q8N0V5 402 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 LILRA2Q8N149 483 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 ATP6V1C2Q8NEY4 427 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 ZNF563Q8TA94 476 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 STON2Q8WXE9 905 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 TMEM120AQ9BXJ8 343 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 FGFR1OP2Q9NVK5 253 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 PAQR5Q9NXK6 330 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-203ENST00000474047 CACNA1DQ01668 2161 aa12.81□□□□□ -0.36
VAMP4-203ENST00000474047 KIAA1549Q9HCM3 1950 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 GJE1A6NN92 205 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 TGM6O95932 706 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 IL18BPO95998 194 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 IL7RP16871 459 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 ADH6P28332 368 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 SFTPDP35247 375 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 ASCL1P50553 236 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 CRISP3P54108 245 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
VAMP4-203ENST00000474047 GUCY1A3Q02108 690 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 FGFBP1Q14512 234 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 PON3Q15166 354 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 QPRTQ15274 297 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 MAPK14Q16539 360 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 EEF1A1P5Q5VTE0 462 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 ADGRE4PQ86SQ3 457 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 POC1BQ8TC44 478 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 TMEM234Q8WY98 164 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 PMM1Q92871 262 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 ZG16BQ96DA0 208 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 REXO5Q96IC2 774 aaKnown RBP12.8□□□□□ -0.36
VAMP4-203ENST00000474047 NPAS1Q99742 590 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 SFXN3Q9BWM7 321 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 PAIP1Q9H074 479 aaKnown RBP12.8□□□□□ -0.36
VAMP4-203ENST00000474047 ENKD1Q9H0I2 346 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 QRSL1Q9H0R6 528 aaKnown RBP12.8□□□□□ -0.36
VAMP4-203ENST00000474047 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-203ENST00000474047 MCTS1Q9ULC4 181 aaKnown RBP12.8□□□□□ -0.36
VAMP4-203ENST00000474047 DOCK7Q96N67 2140 aa12.8□□□□□ -0.36
VAMP4-203ENST00000474047 INTS1Q8N201 2190 aaKnown RBP12.79□□□□□ -0.36
VAMP4-203ENST00000474047 CENPVL1A0A0U1RR11 272 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 PRAMEF27A3QJZ7 478 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 ANGPT2O15123 496 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 BCHEP06276 602 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 CHRM4P08173 479 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 FCGR2AP12318 317 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 PRKCAP17252 672 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 PPIBP23284 216 aaKnown RBP12.79□□□□□ -0.36
VAMP4-203ENST00000474047 ELK4P28324 431 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 RYKP34925 604 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 CPA2P48052 419 aa12.79□□□□□ -0.36
VAMP4-203ENST00000474047 ARFIP2P53365 341 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms