RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PYHIN1Q6K0P9 492 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 ACSM5Q6NUN0 579 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 FAHD2BQ6P2I3 314 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-212ENST00000473961 CCDC80Q76M96 950 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 C18orf25Q96B23 403 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-212ENST00000473961 FAHD2AQ96GK7 314 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 TGM7Q96PF1 710 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 TMEM43Q9BTV4 400 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 NANSQ9NR45 359 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 UFSP2Q9NUQ7 469 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 NMRK1Q9NWW6 199 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 FAM120CQ9NX05 1096 aaKnown RBP3.44□□□□□ -1.86
BRCA1-212ENST00000473961 IMPAD1Q9NX62 359 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 UTP6Q9NYH9 597 aaKnown RBP3.44□□□□□ -1.86
BRCA1-212ENST00000473961 RCOR3Q9P2K3 495 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-212ENST00000473961 PCSK1NQ9UHG2 260 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 CDH9Q9ULB4 789 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 USP6P35125 1406 aa3.44□□□□□ -1.86
BRCA1-212ENST00000473961 IGHV3OR16-10A0A075B7F0 116 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 IGHV3-16A0A0C4DH30 117 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 METTL21EPA6NDL7 271 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 PRR23D1E9PI22 279 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-212ENST00000473961 GOLGA6L19H0YKK7 550 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 OR7A17O14581 309 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 LRRTM2O43300 516 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 B4GALT2O60909 372 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 SH3BGRLO75368 114 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 IGF1P05019 195 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 SERPINB2P05120 415 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 WNT2P09544 360 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 PRR23D2P0DMB1 279 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-212ENST00000473961 ACADSP16219 412 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 TPSB2P20231 275 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 EPS15P42566 896 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 NOVA1P51513 510 aaKnown RBP3.43□□□□□ -1.86
BRCA1-212ENST00000473961 CCNHP51946 323 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-212ENST00000473961 ARHGDIBP52566 201 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 ERVK11-1P61568 191 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 TNFRSF17Q02223 184 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 TPSAB1Q15661 275 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 SSX2Q16385 188 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 CCL14Q16627 93 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 TEX44Q53QW1 395 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 C10orf120Q5SQS8 335 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 BEND3Q5T5X7 828 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 METTL11BQ5VVY1 283 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 OLFML2AQ68BL7 652 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 FAM71F2Q6NXP2 309 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 UTS2BQ765I0 119 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 TGIF2LXQ8IUE1 241 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 LRRC75A-AS1Q8N1F1 130 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 LRRC43Q8N309 656 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 MTURNQ8N3F0 131 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 SPEM1Q8N4L4 309 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 CEP112Q8N8E3 955 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 ZNF491Q8N8L2 437 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 NECAB1Q8N987 351 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 CNIH3Q8TBE1 160 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 MAIP1Q8WWC4 291 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 RAB3CQ96E17 227 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 COQ2Q96H96 371 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 RBM14Q96PK6 669 aaKnown RBP3.43□□□□□ -1.86
BRCA1-212ENST00000473961 NXF5Q9H1B4 397 aaKnown RBP3.43□□□□□ -1.86
BRCA1-212ENST00000473961 RHOJQ9H4E5 214 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 FN3KRPQ9HA64 309 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 MEAF6Q9HAF1 191 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 OARD1Q9Y530 152 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 ASXL1Q8IXJ9 1541 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 PTPRGP23470 1445 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 ERBINQ96RT1 1412 aa3.43□□□□□ -1.86
BRCA1-212ENST00000473961 CEP170Q5SW79 1584 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 LAMC3Q9Y6N6 1575 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 CFTRP13569 1480 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 RTL1A6NKG5 1358 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 POLR3AO14802 1390 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 TRPM1Q7Z4N2 1603 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 A0A0J9YWU9 116 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 A0A0U1RQS6 177 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ZSCAN5CA6NGD5 496 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 USP27XA6NNY8 438 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 H3BQF6 201 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 POLR2DO15514 142 aaKnown RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 GPRIN2O60269 458 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 CIB2O75838 187 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 IL1BP01584 269 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 IGHV3-9P01782 118 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 XRCC1P18887 633 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 NCF2P19878 526 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 MT3P25713 68 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 YWHABP31946 246 aaKnown RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 GCKP35557 465 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ACVR1BP36896 505 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 HPCAL1P37235 193 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 GSK3BP49841 420 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 COX10Q12887 443 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 IL18R1Q13478 541 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 PEX6Q13608 980 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ABRAXAS2Q15018 415 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms