RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 RPP38P78345 283 aaKnown RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 MAPK14Q16539 360 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 MRPL2Q5T653 305 aaKnown RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 OPN5Q6U736 354 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 RANBP3LQ86VV4 465 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 LILRA2Q8N149 483 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 VANGL1Q8TAA9 524 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 NR4A3Q92570 626 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 TMCO6Q96DC7 493 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 SCMH1Q96GD3 660 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF300Q96RE9 604 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 RASL10BQ96S79 203 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 SLX1AQ9BQ83 275 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ANKRD10Q9NXR5 420 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 LRFN1Q9P244 771 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 KCNE5Q9UJ90 142 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ABCG2Q9UNQ0 655 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ENPP4Q9Y6X5 453 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 CENPVL1A0A0U1RR11 272 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 SERINC4A6NH21 518 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 M0R3H8 397 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 AP3D1O14617 1153 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 UGT2B11O75310 529 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 NEURL1O76050 574 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 CRYABP02511 175 aaKnown RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 SP1P08047 785 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 RHCEP18577 417 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 IFNA8P32881 189 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 ADH7P40394 386 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 CYB561P49447 251 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 HLCSP50747 726 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 SSR4P51571 173 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 OC90Q02509 493 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 GK3PQ14409 553 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 TRIP10Q15642 601 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 SPINK14Q6IE38 97 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 OR2T5Q6IEZ7 315 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 SLC25A25Q6KCM7 469 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 HMBOX1Q6NT76 420 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 DEF8Q6ZN54 512 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 C16orf47Q6ZP98 133 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 AMIGO2Q86SJ2 522 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 OR2T29Q8NH02 315 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 ASB15Q8WXK1 588 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 SPACA9Q96E40 222 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 TBL1XR1Q9BZK7 514 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 AMBRA1Q9C0C7 1298 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 POLR2J2Q9GZM3 115 aaKnown RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 POLR2J3Q9H1A7 115 aaKnown RBP12.12□□□□□ -0.47
BRAT1-205ENST00000473879 HHATLQ9HCP6 504 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 NDUFAF4Q9P032 175 aa12.12□□□□□ -0.47
BRAT1-205ENST00000473879 ALG1L2C9J202 215 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 TP53I11O14683 189 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF354AO60765 605 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-205ENST00000473879 E2F6O75461 281 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 EPPINO95925 133 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 CSTAP01040 98 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 UBL4AP11441 157 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 EVI2BP34910 448 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 ST13P50502 369 aaKnown RBP12.11□□□□□ -0.47
BRAT1-205ENST00000473879 TDGF1P3P51864 188 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 NTRK2Q16620 822 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 LYPD8Q6UX82 237 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF550Q7Z398 422 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 MISPQ8IVT2 679 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 GPALPP1Q8IXQ4 340 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 CLIP4Q8N3C7 705 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 TMEM156Q8N614 296 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 POGLUT1Q8NBL1 392 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 ICA1LQ8NDH6 482 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 SDCCAG3Q96C92 435 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 NTNG2Q96CW9 530 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 PRRC1Q96M27 445 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 PIP5K1AQ99755 562 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 SEMA6AQ9H2E6 1030 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 VCXQ9H320 206 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 REEP1Q9H902 201 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 TESQ9UGI8 421 aaKnown RBP12.11□□□□□ -0.47
BRAT1-205ENST00000473879 CHST2Q9Y4C5 530 aa12.11□□□□□ -0.47
BRAT1-205ENST00000473879 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 PRAMEF25A6NGN4 478 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 CLDN24A6NM45 220 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 GTPBP1O00178 669 aaKnown RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 FMO6PO60774 539 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SEMA7AO75326 666 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SLC25A12O75746 678 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms