RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 UBTFL6P0CB48 400 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-222ENST00000473373 NR2F1P10589 423 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 SLC7A1P30825 629 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 SUMO3P55854 103 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-222ENST00000473373 KRTAP10-9P60411 292 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 FOXF1Q12946 379 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 PDCD4Q53EL6 469 aaKnown RBP10.38□□□□□ -0.75
CPNE1-222ENST00000473373 CDH24Q86UP0 819 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 RNF130Q86XS8 419 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 LILRA2Q8N149 483 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 GTPBP8Q8N3Z3 284 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-222ENST00000473373 OR10D3Q8NH80 312 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 FNDC9Q8TBE3 224 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 FIG4Q92562 907 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 ROPN1LQ96C74 230 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 TEX37Q96LM6 180 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 CCDC115Q96NT0 180 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 DNAJB12Q9NXW2 375 aaKnown RBP10.38□□□□□ -0.75
CPNE1-222ENST00000473373 CRIM1Q9NZV1 1036 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 NDRG3Q9UGV2 375 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 BTNL2Q9UIR0 455 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 PROCRQ9UNN8 238 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 EMC9Q9Y3B6 208 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 L3MBTL1Q9Y468 752 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF175Q9Y473 711 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 GPC6Q9Y625 555 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-222ENST00000473373 NF1P21359 2839 aa10.38□□□□□ -0.75
CPNE1-222ENST00000473373 A0A1W2PNV4 684 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 SERINC4A6NH21 518 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 KLF11O14901 512 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 ANKRD28O15084 1053 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 EIF4E2O60573 245 aaKnown RBP10.37□□□□□ -0.75
CPNE1-222ENST00000473373 CRHP06850 196 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 IGFBP2P18065 325 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 PGCP20142 388 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 CRATP43155 626 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 POLR2JP52435 117 aaKnown RBP10.37□□□□□ -0.75
CPNE1-222ENST00000473373 DLX5P56178 289 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 RAC1P63000 192 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 PPP2R2AP63151 447 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 PHC1P78364 1004 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 GNA13Q14344 377 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 FGFBP1Q14512 234 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 EXOC3L2Q2M3D2 409 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 TIGD2Q4W5G0 525 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 KLHL26Q53HC5 615 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 TTMPQ5BVD1 217 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 SAXO2Q658L1 398 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 GTF2IRD2BQ6EKJ0 949 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 VWA1Q6PCB0 445 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 CBLN3Q6UW01 205 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 DCHS2Q6V1P9 2916 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 ESPNLQ6ZVH7 1005 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 EIF3MQ7L2H7 374 aaKnown RBP10.37□□□□□ -0.75
CPNE1-222ENST00000473373 OLIG3Q7RTU3 272 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 HMGN2P46Q86SG4 172 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 GTF2IRD2Q86UP8 949 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 ZNF619Q8N2I2 560 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 METTL25Q8N6Q8 603 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 CHDHQ8NE62 594 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-222ENST00000473373 OR2V1Q8NHB1 315 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 FBXO27Q8NI29 283 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 LINC01560Q8TB33 94 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 TMEM234Q8WY98 164 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 NEURL3Q96EH8 262 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 ITCHQ96J02 903 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 KLHL15Q96M94 604 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 OR52B2Q96RD2 323 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 UCN2Q96RP3 112 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 SH3GL2Q99962 352 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 GPATCH1Q9BRR8 931 aaKnown RBP10.37□□□□□ -0.75
CPNE1-222ENST00000473373 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 INPP5KQ9BT40 448 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 THUMPD3Q9BV44 507 aaKnown RBP10.37□□□□□ -0.75
CPNE1-222ENST00000473373 NMUR2Q9GZQ4 415 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 FANCFQ9NPI8 374 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 TCF7L2Q9NQB0 619 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 SERINC1Q9NRX5 453 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 GALNT8Q9NY28 637 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 ZIM2Q9NZV7 527 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 CLEC4AQ9UMR7 237 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 EDARQ9UNE0 448 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 GPR45Q9Y5Y3 372 aa10.37□□□□□ -0.75
CPNE1-222ENST00000473373 AKAP9Q99996 3911 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 H6PDO95479 791 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
CPNE1-222ENST00000473373 TFPIP10646 304 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 POU2F1P14859 743 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 IL7RP16871 459 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 ELK4P28324 431 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 IL12AP29459 219 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 RYKP34925 604 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 CARD18P57730 90 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 SELENBP1Q13228 472 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 QPRTQ15274 297 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 TMEM176BQ3YBM2 270 aaPredicted RBP10.36□□□□□ -0.75
CPNE1-222ENST00000473373 FBXL19-AS1Q494R0 122 aa10.36□□□□□ -0.75
CPNE1-222ENST00000473373 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
CPNE1-222ENST00000473373 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.36□□□□□ -0.75
CPNE1-222ENST00000473373 ADGRE4PQ86SQ3 457 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms