RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PRAMEF27A3QJZ7 478 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ANKRD33BA6NCL7 494 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 C17orf51A8MQB3 221 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 KDM4EB2RXH2 506 aaPredicted RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 FXYD1O00168 92 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 FADS1O60427 444 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 TRIM3O75382 744 aaPredicted RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 DCTN3O75935 186 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 SOX30O94993 753 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 OXSR1O95747 527 aaPredicted RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 PPIBP23284 216 aaKnown RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 LCN1P31025 176 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 MTPNP58546 118 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 DSTNP60981 165 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 TXNL4AP83876 142 aaKnown RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 HPCAP84074 193 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 TFF3Q07654 80 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 PMPCAQ10713 525 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 FADDQ13158 208 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 SELPLGQ14242 412 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 CAPRIN1Q14444 709 aaKnown RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 RGNQ15493 299 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 SYPL1Q16563 259 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 HYAL4Q2M3T9 481 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ARHGAP11BQ3KRB8 267 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 GPAT3Q53EU6 434 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 RUNDC3AQ59EK9 446 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 COQ5Q5HYK3 327 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 SLC30A6Q6NXT4 461 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ZNF585AQ6P3V2 769 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 MEX3BQ6ZN04 569 aaKnown RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 SLC22A16Q86VW1 577 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 C10orf111Q8N326 155 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ANKFN1Q8N957 763 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 CCDC197Q8NCU1 140 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 RP9Q8TA86 221 aaKnown RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 CA5BP1Q8WTZ4 195 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ROPN1LQ96C74 230 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 TMEM41AQ96HV5 264 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 TREX2Q9BQ50 279 aaPredicted RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 CPPED1Q9BRF8 314 aaPredicted RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 SLC39A3Q9BRY0 314 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 TBL1XR1Q9BZK7 514 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ZNF350Q9GZX5 532 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 SLC6A15Q9H2J7 730 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 ZNF703Q9H7S9 590 aaPredicted RBP8.3□□□□□ -1.08
SMC4-213ENST00000472282 ABCG2Q9UNQ0 655 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 WDR45Q9Y484 360 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 WIF1Q9Y5W5 379 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 CENPEQ02224 2701 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 APCP25054 2843 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 CENPVL1A0A0U1RR11 272 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 EVPLLA8MZ36 301 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 NDUFAB1O14561 156 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 AIM2O14862 343 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 KIAA0513O60268 411 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 FCMRO60667 390 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 STX11O75558 287 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 TOXO94900 526 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 SNX4O95219 450 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 H6PDO95479 791 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 BCHEP06276 602 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 CHRM4P08173 479 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 NR2F1P10589 423 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 IGFBP2P18065 325 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 MAGEA8P43361 318 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 GAS1P54826 345 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 STX5Q13190 355 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 SNTA1Q13424 505 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 GPR68Q15743 365 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 FLYWCH1Q4VC44 716 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 FNDC7Q5VTL7 733 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 OR5M10Q6IEU7 315 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 TYW3Q6IPR3 259 aaKnown RBP8.29□□□□□ -1.08
SMC4-213ENST00000472282 APOOLQ6UXV4 268 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 FRRS1Q6ZNA5 592 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 MARCH3Q86UD3 253 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 LIX1LQ8IVB5 337 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 ZNF614Q8N883 585 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 GATSQ8NAP1 163 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 PCYOX1LQ8NBM8 494 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 OR4C3Q8NH37 302 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 BCAS4Q8TDM0 211 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 RND1Q92730 232 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 NTNG2Q96CW9 530 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 ANKRD27Q96NW4 1050 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 LRRC37BQ96QE4 947 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 TTYH2Q9BSA4 534 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 RTN4RQ9BZR6 473 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 UBQLN4Q9NRR5 601 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 COQ3Q9NZJ6 369 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 PPP4R1LQ9P1A2 415 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 P2RX2Q9UBL9 471 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 MKLN1Q9UL63 735 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 CORO2BQ9UQ03 480 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
SMC4-213ENST00000472282 CSMD2Q7Z408 3487 aa8.28□□□□□ -1.08
SMC4-213ENST00000472282 TRGV5A0A0B4J1U4 118 aa8.28□□□□□ -1.08
SMC4-213ENST00000472282 A0A0G2JNJ9 132 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms