RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	ARSG	Q96EG1	525 aa		13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	MAEL	Q96JY0	434 aa	Known RBP	13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	ZFP3	Q96NJ6	502 aa		13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	SH3GL2	Q99962	352 aa		13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	KLHDC3	Q9BQ90	382 aa		13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	SFXN3	Q9BWM7	321 aa		13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	RBM24	Q9BX46	236 aa	Known RBP	13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	ZIM2	Q9NZV7	527 aa		13.34	□□□□□ -0.27
SSR4-208	ENST00000471880	ZNF195	O14628	629 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	KRT75	O95678	551 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	C1QC	P02747	245 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	NR2F1	P10589	423 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	CRAT	P43155	626 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	IDH3A	P50213	366 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	CBFB	Q13951	182 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	PDSS1	Q5T2R2	415 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	HBM	Q6B0K9	141 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	EIF3M	Q7L2H7	374 aa	Known RBP	13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	LILRA2	Q8N149	483 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	ITCH	Q96J02	903 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	LURAP1	Q96LR2	239 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	EBF4	Q9BQW3	602 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	THUMPD3	Q9BV44	507 aa	Known RBP	13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	SLC24A3	Q9HC58	644 aa		13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	MCTS1	Q9ULC4	181 aa	Known RBP	13.33	□□□□□ -0.28
SSR4-208	ENST00000471880	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	CENPVL1	A0A0U1RR11	272 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880		A0A1W2PNV4	684 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	SYT5	O00445	386 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	NR5A2	O00482	541 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	CXCL13	O43927	109 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	UGT2B17	O75795	530 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	SASH3	O75995	380 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	H6PD	O95479	791 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	IGFBP2	P18065	325 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	RYK	P34925	604 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	EIF1	P41567	113 aa	Known RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	KCNJ5	P48544	419 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	SUMO3	P55854	103 aa	Predicted RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	QPRT	Q15274	297 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	TOMM34	Q15785	309 aa	Predicted RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	SYPL1	Q16563	259 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	COX20	Q5RI15	118 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	TYW3	Q6IPR3	259 aa	Known RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ADGRE4P	Q86SQ3	457 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	KIF18B	Q86Y91	864 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ZNF619	Q8N2I2	560 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ANKFN1	Q8N957	763 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	OR10D3	Q8NH80	312 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ZNF563	Q8TA94	476 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	POC1B	Q8TC44	478 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	MIPOL1	Q8TD10	442 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	C14orf79	Q96F83	325 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	REXO5	Q96IC2	774 aa	Known RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	MAGEB18	Q96M61	343 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	NMUR2	Q9GZQ4	415 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ZNF350	Q9GZX5	532 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	QRSL1	Q9H0R6	528 aa	Known RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	CCDC167	Q9P0B6	97 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ITGB1BP2	Q9UKP3	347 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	PACSIN3	Q9UKS6	424 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	CLEC4A	Q9UMR7	237 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	L3MBTL1	Q9Y468	752 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	ANKRD17	O75179	2603 aa	Known RBP	13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	HEATR5A	Q86XA9	2040 aa		13.32	□□□□□ -0.28
SSR4-208	ENST00000471880	FAM234B	A2RU67	622 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	TUBAL3	A6NHL2	446 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	NPIPB9	F8W1W9	429 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	HMGN4	O00479	90 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	KIAA0513	O60268	411 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	EIF4E2	O60573	245 aa	Known RBP	13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	TGDS	O95455	350 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	IL18BP	O95998	194 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	LINGO3	P0C6S8	592 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	FCGR2A	P12318	317 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	NCF2	P19878	526 aa	Predicted RBP	13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	IL11	P20809	199 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	SLC7A1	P30825	629 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	CTBP2	P56545	445 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	KRTAP10-9	P60411	292 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	RAC1	P63000	192 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	CHRNE	Q04844	493 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	ZNF141	Q15928	474 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	TMEM44	Q2T9K0	475 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	GTDC1	Q4AE62	458 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	HEPHL1	Q6MZM0	1159 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	VWA1	Q6PCB0	445 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	SLC2A7	Q6PXP3	512 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	GGN	Q86UU5	652 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	OR5W2	Q8NH69	310 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	OR2V1	Q8NHB1	315 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	CKAP2	Q8WWK9	683 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	AURKB	Q96GD4	344 aa	Predicted RBP	13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	KLHL15	Q96M94	604 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	UCN2	Q96RP3	112 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	TREX2	Q9BQ50	279 aa	Predicted RBP	13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	PIGM	Q9H3S5	423 aa		13.31	□□□□□ -0.28
SSR4-208	ENST00000471880	CACYBP	Q9HB71	228 aa	Known RBP	13.31	□□□□□ -0.28

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