RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CDC42P60953 191 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 RPS15P62841 145 aaKnown RBP16.1■□□□□ 0.17
HSPG2-208ENST00000471322 ZNF730Q6ZMV8 503 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 SHISA6Q6ZSJ9 500 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 ZSCAN1Q8NBB4 408 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 SLC2A12Q8TD20 617 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 GNPDA2Q8TDQ7 276 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 ACOT11Q8WXI4 607 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-208ENST00000471322 DGCR14Q96DF8 476 aaKnown RBP16.1■□□□□ 0.17
HSPG2-208ENST00000471322 SLC41A3Q96GZ6 507 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 ZNF559Q9BR84 538 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 ITPAQ9BY32 194 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 KRCC1Q9NPI7 259 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-208ENST00000471322 TESQ9UGI8 421 aaKnown RBP16.1■□□□□ 0.17
HSPG2-208ENST00000471322 LHX6Q9UPM6 363 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 FARSAQ9Y285 508 aaKnown RBP16.1■□□□□ 0.17
HSPG2-208ENST00000471322 DTX4Q9Y2E6 619 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 CCDC88CQ9P219 2028 aa16.1■□□□□ 0.17
HSPG2-208ENST00000471322 CENPVL1A0A0U1RR11 272 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 TRAPPC13A5PLN9 417 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 CLDN24A6NM45 220 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 ZAR1LA6NP61 321 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 C21orf140B9A014 251 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 C9J4A7 227 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 ABCB7O75027 752 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 DDAH2O95865 285 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 IGKV3-11P04433 115 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 CHMP24386 653 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 LCN1P31025 176 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 TTKP33981 857 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 ZNF136P52737 540 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 PSPHP78330 225 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 NCF4Q15080 339 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 PTGES3Q15185 160 aaKnown RBP16.09■□□□□ 0.17
HSPG2-208ENST00000471322 LAIR2Q6ISS4 152 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 COX15Q7KZN9 410 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 BCORP1Q8N888 145 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 OR4N2Q8NGD1 307 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 RHOXF1Q8NHV9 184 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 CNIH3Q8TBE1 160 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 STT3BQ8TCJ2 826 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 OR8D2Q9GZM6 311 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 IMPAD1Q9NX62 359 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 COPS7AQ9UBW8 275 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 CTSFQ9UBX1 484 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 REV1Q9UBZ9 1251 aa16.09■□□□□ 0.17
HSPG2-208ENST00000471322 A0A087WUU8 490 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 OR6C76A6NM76 312 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 A8MUA0 341 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 NPIPB9F8W1W9 429 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 CNOT3O75175 753 aaKnown RBP16.08■□□□□ 0.17
HSPG2-208ENST00000471322 IGKV1D-16P01601 117 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 ZGLP1P0C6A0 271 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 RFX3P48380 749 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 IL10RAQ13651 578 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 FOXB2Q5VYV0 432 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 OVCH1Q7RTY7 1134 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 ZNF550Q7Z398 422 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 GDF7Q7Z4P5 450 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 ZER1Q7Z7L7 766 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 ZAR1Q86SH2 424 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 CCDC71Q8IV32 467 aaPredicted RBP16.08■□□□□ 0.17
HSPG2-208ENST00000471322 P3H2Q8IVL5 708 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 PRSS58Q8IYP2 241 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 ENTHD1Q8IYW4 607 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 PIGXQ8TBF5 258 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 FAM81AQ8TBF8 368 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 ZNF721Q8TF20 911 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 IPCEF1Q8WWN9 437 aaPredicted RBP16.08■□□□□ 0.17
HSPG2-208ENST00000471322 CCNB1IP1Q9NPC3 277 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 CTPS2Q9NRF8 586 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 GPN3Q9UHW5 284 aaPredicted RBP16.08■□□□□ 0.17
HSPG2-208ENST00000471322 RNF6Q9Y252 685 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 SNX5Q9Y5X3 404 aa16.08■□□□□ 0.17
HSPG2-208ENST00000471322 SCN2AQ99250 2005 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 ATRXP46100 2492 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 BSNQ9UPA5 3926 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 NPIPA5A0A0B4J1W7 369 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 FRG2CA6NGY1 282 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 NPIPA7E9PJI5 369 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 CYC1P08574 325 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 NPIPA8P0DM63 369 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 MMP11P24347 488 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 IDH2P48735 452 aaKnown RBP16.08■□□□□ 0.16
HSPG2-208ENST00000471322 HOXC5Q00444 222 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 PDZK1Q5T2W1 519 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF613Q6PF04 617 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 RNF113BQ8IZP6 322 aaKnown RBP16.08■□□□□ 0.16
HSPG2-208ENST00000471322 LCORQ96JN0 433 aaPredicted RBP16.08■□□□□ 0.16
HSPG2-208ENST00000471322 TUBA1CQ9BQE3 449 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 PRR14Q9BWN1 585 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 GPR87Q9BY21 358 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 TMEM27Q9HBJ8 222 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
HSPG2-208ENST00000471322 CDC14CA4D256 554 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF891A8MT65 544 aaPredicted RBP16.07■□□□□ 0.16
HSPG2-208ENST00000471322 IL33O95760 270 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 JUNBP17275 347 aaPredicted RBP16.07■□□□□ 0.16
HSPG2-208ENST00000471322 POU1F1P28069 291 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms