RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 NRIP3Q9NQ35 241 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ATAD3AQ9NVI7 634 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 STMN3Q9NZ72 180 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 ERVK-11Q9UQG0 969 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 OSGIN2Q9Y236 505 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 WBP11Q9Y2W2 641 aaKnown RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 TMED5Q9Y3A6 229 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 HS3ST3B1Q9Y662 390 aa5.75□□□□□ -1.49
PTCD3-208ENST00000469585 MDC1Q14676 2089 aaKnown RBP5.75□□□□□ -1.49
PTCD3-208ENST00000469585 SNRNP200O75643 2136 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 LOC102723996A0A087X1L8 192 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 TRBV5-7A0A0A0MS05 114 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 A6NLC8 198 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 TRPC5OSA6NMA1 111 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 A8MUA0 341 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 HMGB1P1B2RPK0 211 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 C17orf105B2RV13 164 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 SLCO1B7G3V0H7 640 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 PLPP1O14494 284 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 AZIN1O14977 448 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ERAL1O75616 437 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 BCAS2O75934 225 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 RSL1D1O76021 490 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ZFAND5O76080 213 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 DDAH2O95865 285 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CRYABP02511 175 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 SERPINE1P05121 402 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ANXA4P09525 319 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 COX6A1P12074 109 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 TSPAN8P19075 237 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CSNK2A2P19784 350 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MAOAP21397 527 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MPIP34949 423 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 GCKP35557 465 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 HPCAL1P37235 193 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CSRP3P50461 194 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 NR1H2P55055 460 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CASP6P55212 293 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 PSPHP78330 225 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 RBPJQ06330 500 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF763Q0D2J5 394 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 TRAF3Q13114 568 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 STX3Q13277 289 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MFAP5Q13361 173 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CASP8Q14790 479 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ZNHIT3Q15649 155 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CHI3L2Q15782 390 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 INAQ16352 499 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 BAK1Q16611 211 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 UNC50Q53HI1 259 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 UBAP2Q5T6F2 1119 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ASPHD1Q5U4P2 390 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM205Q6UW68 189 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 HSDL2Q6YN16 418 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 LINC00696Q6ZRV3 163 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 IKBIPQ70UQ0 350 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 PRSS41Q7RTY9 318 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 COMMD6Q7Z4G1 85 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CUZD1Q86UP6 607 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 DND1Q8IYX4 353 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 CLYBLQ8N0X4 340 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 TAGAPQ8N103 731 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 EID3Q8N140 333 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ARFGAP2Q8N6H7 521 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MORN4Q8NDC4 146 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 B3GNT7Q8NFL0 401 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 FDCSPQ8NFU4 85 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 RFWD2Q8NHY2 731 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 RAB3IL1Q8TBN0 382 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 WDR20Q8TBZ3 569 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 RIT1Q92963 219 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 PNPLA2Q96AD5 504 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 KLHL29Q96CT2 875 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 ELP4Q96EB1 424 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 WDR77Q9BQA1 342 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MRPL1Q9BYD6 325 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 OR8D2Q9GZM6 311 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 DDX31Q9H8H2 851 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MMP25Q9NPA2 562 aa5.74□□□□□ -1.49
PTCD3-208ENST00000469585 MRTO4Q9UKD2 239 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 EIF3LQ9Y262 564 aaKnown RBP5.74□□□□□ -1.49
PTCD3-208ENST00000469585 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 TRBV11-1A0A0K0K1C0 115 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 WDR91A4D1P6 747 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 OR6C68A6NDL8 312 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 OR6C76A6NM76 312 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 G3V2L1 256 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 KLRC4-KLRK1H3BQV0 150 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 RTCAO00442 366 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 JRKO75564 520 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SCELO95171 688 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 GPR75O95800 540 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 BPGMP07738 259 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SMIM10L1P0DMW3 83 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PORP16435 677 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 CD22P20273 847 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 NT5EP21589 574 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 CYB561P49447 251 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SSR4P51571 173 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SLC26A5P58743 744 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms