RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 ANKRD7Q92527 254 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 OSTF1Q92882 214 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 GFM2Q969S9 779 aaKnown RBP4.62□□□□□ -1.67
PTPN4-209ENST00000469511 TM4SF18Q96CE8 201 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 FBXO17Q96EF6 278 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 CFAP36Q96G28 342 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 MS4A14Q96JA4 679 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 VSTM2LQ96N03 204 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF300Q96RE9 604 aaPredicted RBP4.62□□□□□ -1.67
PTPN4-209ENST00000469511 CAPS2Q9BXY5 557 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 POTEKPQ9BYX7 375 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 DERL2Q9GZP9 239 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 DDX47Q9H0S4 455 aaKnown RBP4.62□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 CXorf36Q9H7Y0 433 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 WDR41Q9HAD4 459 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 EMC7Q9NPA0 242 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 KLHL14Q9P2G3 628 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 GUCA1BQ9UMX6 200 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 CHMP2BQ9UQN3 213 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 RNF11Q9Y3C5 154 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 AP4B1Q9Y6B7 739 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 ATP23Q9Y6H3 246 aa4.62□□□□□ -1.67
PTPN4-209ENST00000469511 TCRBV5S2A0A599 114 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 GXYLT2A0PJZ3 443 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ZC3H12DA2A288 527 aaKnown RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 CXorf49A8MYA2 514 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 GOLGA6L22H0YM25 854 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 M0R1B8 84 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 WNT9BO14905 357 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ADAMDEC1O15204 470 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 RAD51DO75771 328 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 IGHV3-9P01782 118 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ALDOAP04075 364 aaKnown RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ATP1B1P05026 303 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 IGFBP1P08833 259 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 FCGR2AP12318 317 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 MTHFD2P13995 350 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 CD40P25942 277 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 PTX3P26022 381 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 IL12BP29460 328 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SFTPDP35247 375 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 PIK3CBP42338 1070 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 RFX3P48380 749 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SLC25A3Q00325 362 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 PSG6Q00889 435 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 CSTF3Q12996 717 aaKnown RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 CUL3Q13618 768 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 CCNIQ14094 377 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 FASTKD3Q14CZ7 662 aaKnown RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 HBMQ6B0K9 141 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SLC48A1Q6P1K1 146 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SLC22A25Q6T423 547 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 LHFPL2Q6ZUX7 228 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 STK32CQ86UX6 486 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 NUDT13Q86X67 352 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SVOPLQ8N434 492 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ZDHHC22Q8N966 263 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 GATSQ8NAP1 163 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 C7orf57Q8NEG2 295 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 OR7G2Q8NG99 324 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 RNF128Q8TEB7 428 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 FAM216AQ8WUB2 273 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 KLHL29Q96CT2 875 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 RNF145Q96MT1 663 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SNX18Q96RF0 628 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF747Q9BV97 191 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 HDHD5Q9BXW7 423 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 ALG9Q9H6U8 611 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 SAYSD1Q9NPB0 183 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 NGBQ9NPG2 151 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 FARSBQ9NSD9 589 aaKnown RBP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 FAIMQ9NVQ4 179 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 POU2F3Q9UKI9 436 aa4.61□□□□□ -1.67
PTPN4-209ENST00000469511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPN4-209ENST00000469511 GOLGA6L10A0A0M3HER8 536 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 OR5H1A6NKK0 313 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 NUDT19A8MXV4 375 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 K7EPI3 171 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ULK1O75385 1050 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 PGM3O95394 542 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 SYNGR4O95473 234 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 STAMBPO95630 424 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 TTC4O95801 387 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ANGPTL1O95841 491 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 FESP07332 822 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF17P17021 662 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 JUNBP17275 347 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CSNK2A2P19784 350 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 IVDP26440 423 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 SDHAP31040 664 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 DEKP35659 375 aaKnown RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ALDH9A1P49189 494 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ARFIP2P53365 341 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CDH15P55291 814 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CARD18P57730 90 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 HILS1P60008 231 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 PHC1P78364 1004 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 PRR5P85299 388 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms