RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 P2RY2P41231 377 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 SPINT3P49223 89 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 CRISP3P54108 245 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 FOXA1P55317 472 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 CAMK2DQ13557 499 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 AMZ1Q400G9 498 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 LIPMQ5VYY2 423 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 GPR65Q8IYL9 337 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 NXPE1Q8N323 547 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 RELL2Q8NC24 303 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 C2CD4AQ8NCU7 369 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 C3orf49Q96BT1 292 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 TSSK3Q96PN8 268 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 GPR22Q99680 433 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 ACPTQ9BZG2 426 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 MBNL1Q9NR56 388 aaKnown RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 NUDT15Q9NV35 164 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 MED9Q9NWA0 146 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 ASB1Q9Y576 335 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 EDDM13A0A1B0GTR0 161 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 TCRBV5S2A0A599 114 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 MEX3AA1L020 520 aaKnown RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 SEC22BO75396 215 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 F12P00748 615 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 RAP2AP10114 183 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 NME1P15531 152 aaKnown RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 NHLH2Q02577 135 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 CBLBQ13191 982 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 LIPKQ5VXJ0 399 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 KANK2Q63ZY3 851 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 SLC25A24Q6NUK1 477 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 RNF130Q86XS8 419 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 CCDC71Q8IV32 467 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 SCARB1Q8WTV0 552 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 UCN3Q969E3 161 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 LRRC58Q96CX6 371 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 CPNE2Q96FN4 548 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 SCMH1Q96GD3 660 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 PDLIM5Q96HC4 596 aaKnown RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 DDOQ99489 341 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 ENKD1Q9H0I2 346 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 OR51J1Q9H342 316 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 NLE1Q9NVX2 485 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 SVILO95425 2214 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 A0A1W2PPE3 182 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 AP2A2O94973 939 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 HOXC4P09017 264 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 SNRPCP09234 159 aaKnown RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 TMIGD3P0DMS9 266 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 HGFP14210 728 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 PAX6P26367 422 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 CSF2RBP32927 897 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 OPRD1P41143 372 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 IRF8Q02556 426 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 BIKQ13323 160 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 PWP1Q13610 501 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 XKR6Q5GH73 641 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 FAM46CQ5VWP2 391 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 PGAP1Q75T13 922 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 LHFPL3Q86UP9 236 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 SFTPA2Q8IWL1 248 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 DUSP18Q8NEJ0 188 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 PATE1Q8WXA2 126 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 ALG14Q96F25 216 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 C12orf66Q96MD2 445 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 METTL17Q9H7H0 456 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 LHX9Q9NQ69 397 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 FSCN3Q9NQT6 498 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 OXSMQ9NWU1 459 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 H2AFY2Q9P0M6 372 aaPredicted RBP9.3□□□□□ -0.92
NUP50-214ENST00000469163 SPASTQ9UBP0 616 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 DENND4AQ7Z401 1863 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 NINQ8N4C6 2090 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 PDCD11Q14690 1871 aaKnown RBP9.29□□□□□ -0.92
NUP50-214ENST00000469163 A0A1B0GTL3 188 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 TMEM210A6NLX4 147 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 OR2AT4A6NND4 320 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 B4DGG1 531 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 CYTIPO60759 359 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 RP2O75695 350 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 C1SP09871 688 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 SAGP10523 405 aaPredicted RBP9.29□□□□□ -0.92
NUP50-214ENST00000469163 NTSR1P30989 418 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 MAPK8P45983 427 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 RPL38P63173 70 aaKnown RBP9.29□□□□□ -0.92
NUP50-214ENST00000469163 FOXK1P85037 733 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 SRSF5Q13243 272 aaKnown RBP9.29□□□□□ -0.92
NUP50-214ENST00000469163 EIF4EBP2Q13542 120 aaPredicted RBP9.29□□□□□ -0.92
NUP50-214ENST00000469163 GCNT6Q5T4J0 391 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 DDI2Q5TDH0 399 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 TPRA1Q86W33 373 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 ADGRF3Q8IZF5 1079 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 STOML3Q8TAV4 291 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 METTL21AQ8WXB1 218 aa9.29□□□□□ -0.92
NUP50-214ENST00000469163 ACOT11Q8WXI4 607 aaPredicted RBP9.29□□□□□ -0.92
NUP50-214ENST00000469163 MS4A4EQ96PG1 132 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms