RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 POU2F2P09086 479 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HAPLN1P10915 354 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SLC25A4P12235 298 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OSMP13725 252 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PAX1P15863 534 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CBR1P16152 277 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CXCL2P19875 107 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CXCL3P19876 107 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HOXA5P20719 270 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 UQCRC2P22695 453 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PRPH2P23942 346 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MPGP29372 298 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PCGF2P35227 344 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MAS1LP35410 378 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PBX3P40426 434 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 RBM34P42696 430 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 GPR3P46089 330 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CDX1P47902 265 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 KCNJ3P48549 501 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TAF6P49848 677 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CCR4P51679 360 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SCAND1P57086 179 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 VSX2P58304 361 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TAS2R43P59537 309 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 DCAF7P61962 342 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 WDR5P61964 334 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 RAP1AP62834 184 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SELENOWP63302 87 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 FABP9Q0Z7S8 132 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SRSF5Q13243 272 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HTR4Q13639 388 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 DDX39BQ13838 428 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HABP2Q14520 560 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HEPACAMQ14CZ8 416 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 P2RY14Q15391 338 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ST3GAL2Q16842 350 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 IFI44LQ53G44 452 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM31Q5JXX7 168 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PRAMEF19Q5SWL8 479 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MARCH8Q5T0T0 291 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ANXA8L1Q5VT79 327 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM244Q5VVB8 128 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 AFMIDQ63HM1 303 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TPGS2Q68CL5 300 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF626Q68DY1 528 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 C22orf42Q6IC83 251 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 FRMPD2BQ6IN97 320 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SLC30A6Q6NXT4 461 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CDC73Q6P1J9 531 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 C11orf88Q6PI97 169 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ATRAIDQ6UW56 229 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 DRAM2Q6UX65 266 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CD300LDQ6UXZ3 194 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF813Q6ZN06 617 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PLEKHH3Q7Z736 793 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM200AQ86VY9 491 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 KLBQ86Z14 1044 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 DENND1CQ8IV53 801 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM192Q8IY95 271 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PUSL1Q8N0Z8 303 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 FAM86B1Q8N7N1 296 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 C7orf31Q8N865 590 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 L3MBTL4Q8NA19 623 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF527Q8NB42 609 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 AVL9Q8NBF6 648 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ADPRHL1Q8NDY3 354 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM185AQ8NFB2 350 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OR5T1Q8NG75 326 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OR13D1Q8NGV5 346 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OR4K15Q8NH41 348 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OR52P1PQ8NH57 321 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 STOML3Q8TAV4 291 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PHOSPHO1Q8TCT1 267 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 CCDC107Q8WV48 283 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TRAPPC12Q8WVT3 735 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 GEMIN6Q8WXD5 167 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 KCTD13Q8WZ19 329 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 RNFT2Q96EX2 444 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 C12orf42Q96LP6 360 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 NECTIN4Q96NY8 510 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 HBEGFQ99075 208 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 FEVQ99581 238 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SEPT5Q99719 369 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 VRK1Q99986 396 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MESP1Q9BRJ9 268 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 ZPBPQ9BS86 351 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 FSD1LQ9BXM9 530 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MRPL37Q9BZE1 423 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MFFQ9GZY8 342 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TKTL2Q9H0I9 626 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 C20orf85Q9H1P6 137 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 PORCNQ9H237 461 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 SYT4Q9H2B2 425 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 BCAS3Q9H6U6 928 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 AGO3Q9H9G7 860 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TNFRSF12AQ9NP84 129 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MMP26Q9NRE1 261 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MAN2C1Q9NTJ4 1040 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms