RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 UMODP07911 640 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CELA2AP08217 269 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CD63P08962 238 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 RAB40ALP0C0E4 278 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ZCCHC18P0CG32 403 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 NR2F1P10589 423 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ACP2P11117 423 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 EGR2P11161 476 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ITGAMP11215 1152 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 S1PR1P21453 382 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PPIBP23284 216 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PTPN6P29350 595 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 AQP1P29972 269 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 FRKP42685 505 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 KHKP50053 298 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 NR0B1P51843 470 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 EEFSECP57772 596 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 DSTNP60981 165 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 IGLV3-21P80748 117 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 MS4A2Q01362 244 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 FOXD4Q12950 439 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SRSF6Q13247 344 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SCARB2Q14108 478 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNHIT3Q15649 155 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CEBPEQ15744 281 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 NNATQ16517 81 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SYPL1Q16563 259 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 BTBD16Q32M84 506 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PIGGQ5H8A4 983 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CCNJQ5T5M9 372 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ATAD3BQ5T9A4 648 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 C1orf146Q5VVC0 180 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SAXO2Q658L1 398 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 C8orf82Q6P1X6 216 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 BHLHB9Q6PI77 547 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PAPD4Q6PIY7 484 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 TMEM64Q6YI46 380 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 C16orf62Q7Z3J2 963 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ARPINQ7Z6K5 226 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 HMGN2P46Q86SG4 172 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SPATA24Q86W54 205 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 DHFR2Q86XF0 187 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 MICU2Q8IYU8 434 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PRR22Q8IZ63 422 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 Q8N1X5 172 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 C10orf111Q8N326 155 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 LNX2Q8N448 690 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC15A4Q8N697 577 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ANKFN1Q8N957 763 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR2T12Q8NG77 320 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR4N2Q8NGD1 307 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR8J3Q8NGG0 315 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR10Q1Q8NGQ4 319 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR2Y1Q8NGV0 311 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR14A16Q8NHC5 309 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 NFKBIDQ8NI38 313 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC2A12Q8TD20 617 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SFXN5Q8TD22 340 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 GPR151Q8TDV0 419 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC26A7Q8TE54 656 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 WDR60Q8WVS4 1066 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CDS1Q92903 461 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 DAZLQ92904 295 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 KIAA1143Q96AT1 154 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 FKBP10Q96AY3 582 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 MOAP1Q96BY2 351 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 NEURL3Q96EH8 262 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF764Q96H86 408 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF583Q96ND8 569 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR7D2Q96RA2 312 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 GAL3ST4Q96RP7 486 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 LPAR4Q99677 370 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PELOQ9BRX2 385 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SCNM1Q9BWG6 230 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ITPAQ9BY32 194 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ACTRT3Q9BYD9 372 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SPRY4Q9C004 299 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC26A1Q9H2B4 701 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 MMADHCQ9H3L0 296 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 EPS8L2Q9H6S3 715 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 KAT8Q9H7Z6 458 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 GPN2Q9H9Y4 310 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CXorf21Q9HAI6 301 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 FOLH1BQ9HBA9 442 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF160Q9HCG1 818 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 THSD1Q9NS62 852 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 GIN1Q9NXP7 522 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PTGFRNQ9P2B2 879 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 COPS7AQ9UBW8 275 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PRODH2Q9UF12 536 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 TESQ9UGI8 421 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CD300AQ9UGN4 299 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 IL17BQ9UHF5 180 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC7A8Q9UHI5 535 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 NXT1Q9UKK6 140 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PRPF19Q9UMS4 504 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 C19orf53Q9UNZ5 99 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CORO2BQ9UQ03 480 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PADI2Q9Y2J8 665 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 AP3M1Q9Y2T2 418 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms