RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 RUNDC3AQ59EK9 446 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 RPS26P11Q5JNZ5 115 aaPredicted RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 NSUN5P2Q63ZY6 315 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 EIF3MQ7L2H7 374 aaKnown RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 MAMDC2Q7Z304 686 aaPredicted RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 SPATA21Q7Z572 469 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 TOR1AIP2Q8NFQ8 470 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 OR5W2Q8NH69 310 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 RND1Q92730 232 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 PMM1Q92871 262 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 TREX2Q9BQ50 279 aaPredicted RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 MTHFD2LQ9H903 347 aaPredicted RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 PLEKHB1Q9UF11 243 aaPredicted RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.45■■□□□ 1.34
PDCD4-205ENST00000467574 RNF6Q9Y252 685 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 SLC35A3Q9Y2D2 325 aa23.45■■□□□ 1.34
PDCD4-205ENST00000467574 H0Y3Z8 333 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 TOXO94900 526 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 NTN1O95631 604 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 UBTFL6P0CB48 400 aaPredicted RBP23.44■■□□□ 1.34
PDCD4-205ENST00000467574 PEPDP12955 493 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 GPX2P18283 190 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 POU3F2P20265 443 aaPredicted RBP23.44■■□□□ 1.34
PDCD4-205ENST00000467574 ADSLP30566 484 aaPredicted RBP23.44■■□□□ 1.34
PDCD4-205ENST00000467574 CRISP3P54108 245 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 SRYQ05066 204 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 FOXF1Q12946 379 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 TMCO5AQ8N6Q1 288 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 SDCCAG3Q96C92 435 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 RNF145Q96MT1 663 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 ANKRD27Q96NW4 1050 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 CGREF1Q99674 301 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 TRIM8Q9BZR9 551 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 CALML5Q9NZT1 146 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 ARMCX1Q9P291 453 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 UNC79Q9P2D8 2635 aa23.44■■□□□ 1.34
PDCD4-205ENST00000467574 A0A0G2JNJ9 132 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 CD8B2A6NJW9 211 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 H0YC42 278 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 H3BML4 177 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 ETV2O00321 342 aaPredicted RBP23.43■■□□□ 1.34
PDCD4-205ENST00000467574 ARAFP10398 606 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 SUCLG1P53597 346 aaKnown RBP23.43■■□□□ 1.34
PDCD4-205ENST00000467574 TPD52P55327 224 aaPredicted RBP23.43■■□□□ 1.34
PDCD4-205ENST00000467574 CLDN20P56880 219 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 KCNJ10P78508 379 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 ART3Q13508 389 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 SELPLGQ14242 412 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 RIPPLY2Q5TAB7 128 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 GGNQ86UU5 652 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 LACC1Q8IV20 430 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 CCDC71Q8IV32 467 aaPredicted RBP23.43■■□□□ 1.34
PDCD4-205ENST00000467574 UCN2Q96RP3 112 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 ELAC2Q9BQ52 826 aaKnown RBP23.43■■□□□ 1.34
PDCD4-205ENST00000467574 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.43■■□□□ 1.34
PDCD4-205ENST00000467574 CLCF1Q9UBD9 225 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 Q9UFV3 132 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 AP4B1Q9Y6B7 739 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 CAPN7Q9Y6W3 813 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 HCFC1P51610 2035 aa23.43■■□□□ 1.34
PDCD4-205ENST00000467574 CELSR2Q9HCU4 2923 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 FAM47E-STBD1D6RA91 191 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 FXYD1O00168 92 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 SLC22A2O15244 555 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 ADAM11O75078 769 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 NID1P14543 1247 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 PRKCAP17252 672 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 CCR4P51679 360 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 GNGT1P63211 74 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 NFYCQ13952 458 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 ADRM1Q16186 407 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 COQ5Q5HYK3 327 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 GCNT6Q5T4J0 391 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 PRAMEF8Q5VWM4 474 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 PRAMEF7Q5VXH5 474 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 SNX32Q86XE0 403 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 NAXEQ8NCW5 288 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 WDR60Q8WVS4 1066 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 CNOT9Q92600 299 aaKnown RBP23.42■■□□□ 1.34
PDCD4-205ENST00000467574 TRIB1Q96RU8 372 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 CALHM2Q9HA72 323 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 BCL2L10Q9HD36 194 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 EXOSC3Q9NQT5 275 aaKnown RBP23.42■■□□□ 1.34
PDCD4-205ENST00000467574 DNAJB12Q9NXW2 375 aaKnown RBP23.42■■□□□ 1.34
PDCD4-205ENST00000467574 CORO2BQ9UQ03 480 aa23.42■■□□□ 1.34
PDCD4-205ENST00000467574 MBD3L4A6NDZ8 208 aaPredicted RBP23.41■■□□□ 1.34
PDCD4-205ENST00000467574 MBD3L3A6NE82 208 aaPredicted RBP23.41■■□□□ 1.34
PDCD4-205ENST00000467574 MBD3L5A6NJ08 208 aaPredicted RBP23.41■■□□□ 1.34
PDCD4-205ENST00000467574 CLCA1A8K7I4 914 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 SNX3O60493 162 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 NUDT14O95848 222 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 DBIP07108 87 aaKnown RBP23.41■■□□□ 1.34
PDCD4-205ENST00000467574 IL11P20809 199 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 CEACAM8P31997 349 aaPredicted RBP23.41■■□□□ 1.34
PDCD4-205ENST00000467574 CBFBQ13951 182 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 QPRTQ15274 297 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 SF3B4Q15427 424 aaKnown RBP eCLIP23.41■■□□□ 1.347e-7■■□□□ 13.4
PDCD4-205ENST00000467574 TRMT5Q32P41 509 aaKnown RBP23.41■■□□□ 1.34
PDCD4-205ENST00000467574 SLC25A53Q5H9E4 307 aa23.41■■□□□ 1.34
PDCD4-205ENST00000467574 REP15Q6BDI9 236 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms