RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CARD8Q9Y2G2 431 aa8.56□□□□□ -1.04
SDCCAG3-208ENST00000466579 NDUFAF1Q9Y375 327 aa8.56□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZNF337Q9Y3M9 751 aa8.56□□□□□ -1.04
SDCCAG3-208ENST00000466579 L3MBTL1Q9Y468 752 aa8.56□□□□□ -1.04
SDCCAG3-208ENST00000466579 AP4B1Q9Y6B7 739 aa8.56□□□□□ -1.04
SDCCAG3-208ENST00000466579 ADGRG4Q8IZF6 3080 aa8.56□□□□□ -1.04
SDCCAG3-208ENST00000466579 A0A0G2JNJ9 132 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 KDM4EB2RXH2 506 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 FBP2O00757 339 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 CLDN14O95500 239 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 ARAFP10398 606 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 NR2F1P10589 423 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 ELK4P28324 431 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 CHRNB4P30926 498 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 EIF1P41567 113 aaKnown RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 CRATP43155 626 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 STARP49675 285 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 HPCAP84074 193 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 PMPCAQ10713 525 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 KLF10Q13118 480 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 GNA13Q14344 377 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 CDSNQ15517 529 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 GPAT3Q53EU6 434 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 RAET1LQ5VY80 246 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 POMZP3Q6PJE2 187 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 EIF3MQ7L2H7 374 aaKnown RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 MED12LQ86YW9 2145 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 C10orf111Q8N326 155 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 OR5W2Q8NH69 310 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 LILRB4Q8NHJ6 448 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZNF524Q96C55 264 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 SH3YL1Q96HL8 342 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 ADGRG7Q96K78 797 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 ANKRD27Q96NW4 1050 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 NPAS1Q99742 590 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 TREX2Q9BQ50 279 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 TUBA1CQ9BQE3 449 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 IKZF5Q9H5V7 419 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 TMEM38AQ9H6F2 299 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 FAM53CQ9NYF3 392 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 CLCF1Q9UBD9 225 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 Q9UFV3 132 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 CORO2BQ9UQ03 480 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 RNF6Q9Y252 685 aa8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 RPH3AQ9Y2J0 694 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 GPC6Q9Y625 555 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-208ENST00000466579 HCFC1P51610 2035 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 A0A0G2JPF8 293 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 HSPB2A8KAH6 182 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 BBIP1A8MTZ0 92 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 HNRNPCL2B2RXH8 293 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 HNRNPCL3B7ZW38 293 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 FAAHO00519 579 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ANGPT2O15123 496 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ADAMDEC1O15204 470 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 EFNA2O43921 213 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 HNRNPCL1O60812 293 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 BCAS1O75363 584 aaPredicted RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 CSTAP01040 98 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 NPPAP01160 153 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 DBIP07108 87 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 THBS1P07996 1170 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 NUDT7P0C024 238 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 HNRNPCL4P0DMR1 293 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 NID1P14543 1247 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 PRKCAP17252 672 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 POU3F2P20265 443 aaPredicted RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 DRD4P21917 467 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 LSP1P33241 339 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZNF41P51814 821 aaPredicted RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 SUCLG1P53597 346 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 CRISP3P54108 245 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 EEFSECP57772 596 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 RAC1P63000 192 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 KCNJ10P78508 379 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 CBFBQ13951 182 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 TOMM34Q15785 309 aaPredicted RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 HSPB2Q16082 182 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ADRM1Q16186 407 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZSWIM7Q19AV6 140 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 NDUFAF6Q330K2 333 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 NET1Q7Z628 596 aaPredicted RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 DHDDSQ86SQ9 333 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 GGNQ86UU5 652 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 GRAMD2AQ8IUY3 354 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 OR5M1Q8NGP8 315 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ST8SIA1Q92185 356 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 WNT2BQ93097 391 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 SLC35B4Q969S0 331 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 TMEM19Q96HH6 336 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 MRGPRX4Q96LA9 322 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZFP3Q96NJ6 502 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 CGREF1Q99674 301 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 QRSL1Q9H0R6 528 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 ACER3Q9NUN7 267 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 COQ3Q9NZJ6 369 aa8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 VDAC3Q9Y277 283 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms