RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF181Q2M3W8 571 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CT45A2Q5DJT8 189 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 TMEM164Q5U3C3 297 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 HEPHL1Q6MZM0 1159 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 Q6ZPB1 254 aaPredicted RBP17.18■□□□□ 0.34
CAPN3-209ENST00000466222 C16orf62Q7Z3J2 963 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 ZAR1Q86SH2 424 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 TMPRSS12Q86WS5 348 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CT55Q8WUE5 264 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 METTL21AQ8WXB1 218 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 WDR77Q9BQA1 342 aaPredicted RBP17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CDCA4Q9BXL8 241 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 WDR54Q9H977 334 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 KCND3Q9UK17 655 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAPN3-209ENST00000466222 LAMA5O15230 3695 aa17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CNOT1A5YKK6 2376 aaKnown RBP17.18■□□□□ 0.34
CAPN3-209ENST00000466222 CENPVL1A0A0U1RR11 272 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 CDC14CA4D256 554 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 C9J4A7 227 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 MASP2O00187 686 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 COQ9O75208 318 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 ADORA3P0DMS8 318 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 F8A1P23610 371 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 C21orf33P30042 268 aaPredicted RBP17.17■□□□□ 0.34
CAPN3-209ENST00000466222 OR1E2P47887 323 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 GABREP78334 506 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 TIMM50Q3ZCQ8 353 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 COMTD1Q86VU5 262 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 C9orf40Q8IXQ3 194 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 COX18Q8N8Q8 333 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 WFDC6Q9BQY6 131 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 ARMC7Q9H6L4 198 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 CPNE5Q9HCH3 593 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 RLIMQ9NVW2 624 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 NPIPA5A0A0B4J1W7 369 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 DCDC2BA2VCK2 349 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 PRAMEF25A6NGN4 478 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 DUXAA6NLW8 204 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 NPIPA7E9PJI5 369 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 SLC30A4O14863 429 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 PDE9AO76083 593 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 MFN2O95140 757 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 IGKV1D-16P01601 117 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 CCNYL3P0C7X3 344 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 NPIPA8P0DM63 369 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 PIPP12273 146 aaPredicted RBP17.17■□□□□ 0.34
CAPN3-209ENST00000466222 GADD45AP24522 165 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 GPR143P51810 404 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 CRISP3P54108 245 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF45Q02386 682 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 ATAD3BQ5T9A4 648 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 TMEM205Q6UW68 189 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 OR52J3Q8NH60 311 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 HOXB13Q92826 284 aaPredicted RBP17.17■□□□□ 0.34
CAPN3-209ENST00000466222 DAZLQ92904 295 aaKnown RBP17.17■□□□□ 0.34
CAPN3-209ENST00000466222 SDF2Q99470 211 aa17.17■□□□□ 0.34
CAPN3-209ENST00000466222 ZAR1LA6NP61 321 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 UPK1BO75841 260 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 NKX2-2O95096 273 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 OXSR1O95747 527 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 IFI6P09912 130 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 ANXA11P50995 505 aaKnown RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 DCST2Q5T1A1 773 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 PAPD4Q6PIY7 484 aaKnown RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 C16orf47Q6ZP98 133 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 CPEB2Q7Z5Q1 589 aaKnown RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 NFAM1Q8NET5 270 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 GPR32P1Q8NGA4 272 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 OR1N1Q8NGS0 311 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 OR14A16Q8NHC5 309 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF578Q96N58 590 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 SLC46A1Q96NT5 459 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 TRNT1Q96Q11 434 aaKnown RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 GAL3ST4Q96RP7 486 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 LMF2Q9BU23 707 aaKnown RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 RACGAP1Q9H0H5 632 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 DUSP22Q9NRW4 184 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 CLN6Q9NWW5 311 aa17.16■□□□□ 0.34
CAPN3-209ENST00000466222 ZNF223Q9UK11 482 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-209ENST00000466222 AGAP5A6NIR3 686 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 DYRK3O43781 588 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 KCNK2O95069 426 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ADAP00813 363 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 STSP08842 583 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 GSSP48637 474 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 CRISP1P54107 249 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 PRKCDQ05655 676 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ST3GAL4Q11206 333 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ARHGAP11BQ3KRB8 267 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 COLEC12Q5KU26 742 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ZCCHC12Q6PEW1 402 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 FRRS1Q6ZNA5 592 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 TAGAPQ8N103 731 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 APCDD1LQ8NCL9 501 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 OR9Q2Q8NGE9 314 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 OR2Y1Q8NGV0 311 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ADAMTS14Q8WXS8 1223 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ZBTB20Q9HC78 741 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 GPR83Q9NYM4 423 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms