RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TSPYL5Q86VY4 417 aaPredicted RBP10.15□□□□□ -0.78
VCP-204ENST00000466100 CARM1Q86X55 608 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 RBM45Q8IUH3 476 aaKnown RBP10.15□□□□□ -0.78
VCP-204ENST00000466100 ZFP62Q8NB50 900 aaPredicted RBP10.15□□□□□ -0.78
VCP-204ENST00000466100 TMEM178AQ8NBL3 297 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 OR6T1Q8NGN1 323 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 SLC26A7Q8TE54 656 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 PHF10Q8WUB8 498 aaKnown RBP10.15□□□□□ -0.78
VCP-204ENST00000466100 GEMIN6Q8WXD5 167 aaKnown RBP10.15□□□□□ -0.78
VCP-204ENST00000466100 LZICQ8WZA0 190 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 PROX1Q92786 737 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 SLCO4A1Q96BD0 722 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 ARSGQ96EG1 525 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 DUS3LQ96G46 650 aaKnown RBP10.15□□□□□ -0.78
VCP-204ENST00000466100 PYURFQ96I23 114 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 TPD52L3Q96J77 140 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 C7orf34Q96L11 122 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 ZNF597Q96LX8 424 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 LRGUKQ96M69 825 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 UBQLN3Q9H347 655 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 EVA1AQ9H8M9 152 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 PPP4R1LQ9P1A2 415 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 FBXL2Q9UKC9 423 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 V9GYQ6 96 aa10.15□□□□□ -0.78
VCP-204ENST00000466100 COL6A6A6NMZ7 2263 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 DHRS12A0PJE2 317 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ANKUB1A6NFN9 424 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ETV2O00321 342 aaPredicted RBP10.14□□□□□ -0.79
VCP-204ENST00000466100 AP3D1O14617 1153 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 GNB5O14775 395 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 HCRTR2O43614 444 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 GPIP06744 558 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 GKN3PP0CG01 181 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 UMPSP11172 480 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ELAVL4P26378 380 aaKnown RBP10.14□□□□□ -0.79
VCP-204ENST00000466100 HTR2AP28223 471 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 MSX1P28360 303 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 OR1E2P47887 323 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 MEOX1P50221 254 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ERFP50548 548 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 P2RX1P51575 399 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 DLX5P56178 289 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 VLDLRP98155 873 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 KCNC4Q03721 635 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 HYAL4Q2M3T9 481 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 IFI44LQ53G44 452 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 SLC6A19Q695T7 634 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 OR5M10Q6IEU7 315 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 PACS2Q86VP3 889 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 SPATA24Q86W54 205 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 PLCZ1Q86YW0 608 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ZNF440Q8IYI8 595 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 OR5W2Q8NH69 310 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 B4GALNT2Q8NHY0 566 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 GPR119Q8TDV5 335 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 CANT1Q8WVQ1 401 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 POP5Q969H6 163 aaKnown RBP10.14□□□□□ -0.79
VCP-204ENST00000466100 SH3YL1Q96HL8 342 aaPredicted RBP10.14□□□□□ -0.79
VCP-204ENST00000466100 ARHGAP9Q9BRR9 750 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 DSN1Q9H410 356 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ARMC7Q9H6L4 198 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 MAGIXQ9H6Y5 334 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ZNF703Q9H7S9 590 aaPredicted RBP10.14□□□□□ -0.79
VCP-204ENST00000466100 HHATLQ9HCP6 504 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ZFP64Q9NPA5 681 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
VCP-204ENST00000466100 SDHAF3Q9NRP4 125 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 MED11Q9P086 117 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 ANAPC2Q9UJX6 822 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 LHX6Q9UPM6 363 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 B3GNT3Q9Y2A9 372 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 C15orf41Q9Y2V0 281 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 SH3GLB1Q9Y371 365 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 KIAA1549Q9HCM3 1950 aa10.14□□□□□ -0.79
VCP-204ENST00000466100 KLRC4-KLRK1H3BQV0 150 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 GTPBP1O00178 669 aaKnown RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 FMO6PO60774 539 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 PRSS23O95084 383 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 WISP1O95388 367 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 STAMBPO95630 424 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 RFPL3SP0C7P2 107 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 SLC6A8P48029 635 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 MASP1P48740 699 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 RGS8P57771 180 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 HOXC5Q00444 222 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 TOMM34Q15785 309 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 PLEKHN1Q494U1 663 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 ZNF550Q7Z398 422 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 TMCO5AQ8N6Q1 288 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 Q8NA96 180 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 PAPD5Q8NDF8 572 aaKnown RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 OR1J4Q8NGS1 313 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 VANGL1Q8TAA9 524 aaPredicted RBP10.13□□□□□ -0.79
VCP-204ENST00000466100 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 PNPLA2Q96AD5 504 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 C1GALT1C1Q96EU7 318 aa10.13□□□□□ -0.79
VCP-204ENST00000466100 SLC47A1Q96FL8 570 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms