RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CLDN18P56856 261 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 ADORA2A-AS1P86434 159 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 CAPRIN1Q14444 709 aaKnown RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 RPS26P11Q5JNZ5 115 aaPredicted RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 RAET1LQ5VY80 246 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 ENPP6Q6UWR7 440 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 NET1Q7Z628 596 aaPredicted RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 RPRMLQ8N4K4 120 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 POU5F2Q8N7G0 328 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 OR5W2Q8NH69 310 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 POC1BQ8TC44 478 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 GPR119Q8TDV5 335 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 ZNF524Q96C55 264 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 NPAS1Q99742 590 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 SLC39A3Q9BRY0 314 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 EXOSC3Q9NQT5 275 aaKnown RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.38■□□□□ 0.53
SKA3-205ENST00000465471 VDAC3Q9Y277 283 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 COL12A1Q99715 3063 aa18.38■□□□□ 0.53
SKA3-205ENST00000465471 USP9YO00507 2555 aaPredicted RBP18.37■□□□□ 0.53
SKA3-205ENST00000465471 ARHGAP21Q5T5U3 1957 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 PTPN13Q12923 2485 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 CLDN24A6NM45 220 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 AHRRA9YTQ3 701 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 NTN1O95631 604 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 COX4I1P13073 169 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 TCEA1P23193 301 aaKnown RBP18.37■□□□□ 0.53
SKA3-205ENST00000465471 GZMMP51124 257 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 ZNF41P51814 821 aaPredicted RBP18.37■□□□□ 0.53
SKA3-205ENST00000465471 BCL2A1Q16548 175 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 MMEL1Q495T6 779 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 NANOGP8Q6NSW7 305 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 ZNF585AQ6P3V2 769 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 NCCRP1Q6ZVX7 275 aaPredicted RBP18.37■□□□□ 0.53
SKA3-205ENST00000465471 PTOV1Q86YD1 416 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 PEX5LQ8IYB4 626 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 OR8J3Q8NGG0 315 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 BBS10Q8TAM1 723 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 WDR60Q8WVS4 1066 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 CCT8L2Q96SF2 557 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 NANOGQ9H9S0 305 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 ARL2BPQ9Y2Y0 163 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 ZNF337Q9Y3M9 751 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 PCNX1Q96RV3 2341 aa18.37■□□□□ 0.53
SKA3-205ENST00000465471 SPTAN1Q13813 2472 aaKnown RBP18.37■□□□□ 0.53
SKA3-205ENST00000465471 SHISA8B8ZZ34 492 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 ZG16O60844 167 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 PGM3O95394 542 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 THBS1P07996 1170 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 UBTFL6P0CB48 400 aaPredicted RBP18.36■□□□□ 0.53
SKA3-205ENST00000465471 ESRRAP11474 423 aaPredicted RBP18.36■□□□□ 0.53
SKA3-205ENST00000465471 ETS2P15036 469 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 STARP49675 285 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 DLX5P56178 289 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 CDK6Q00534 326 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 CBFBQ13951 182 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 TOMM34Q15785 309 aaPredicted RBP18.36■□□□□ 0.53
SKA3-205ENST00000465471 ACSF3Q4G176 576 aaPredicted RBP18.36■□□□□ 0.53
SKA3-205ENST00000465471 SLC25A53Q5H9E4 307 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 C1orf185Q5T7R7 199 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 RNF220Q5VTB9 566 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 ADGRE4PQ86SQ3 457 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 ANKS4BQ8N8V4 417 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 PCYOX1LQ8NBM8 494 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 OR5M1Q8NGP8 315 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 NFKBIDQ8NI38 313 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 RCN3Q96D15 328 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 THUMPD3Q9BV44 507 aaKnown RBP18.36■□□□□ 0.53
SKA3-205ENST00000465471 DNAJB12Q9NXW2 375 aaKnown RBP18.36■□□□□ 0.53
SKA3-205ENST00000465471 ADAM21Q9UKJ8 722 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 DOPEY2Q9Y3R5 2298 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 CHST2Q9Y4C5 530 aa18.36■□□□□ 0.53
SKA3-205ENST00000465471 CDHR4A6H8M9 788 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 FAM47E-STBD1D6RA91 191 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 ADAM11O75078 769 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 FAM107AO95990 144 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 PEPDP12955 493 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 IL7RP16871 459 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 PRKCAP17252 672 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 ADH6P28332 368 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 EIF1P41567 113 aaKnown RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 CLDN15P56746 228 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 EEF1A1P68104 462 aaKnown RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 RBBP4Q09028 425 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 FOXF1Q12946 379 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 LIN52Q52LA3 116 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 MRPL2Q5T653 305 aaKnown RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 TMEM211Q6ICI0 200 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 REEP3Q6NUK4 255 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 RPTNQ6XPR3 784 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 B3GNT6Q6ZMB0 384 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 ZNF836Q6ZNA1 936 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 SERPINA11Q86U17 422 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 VRK2Q86Y07 508 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 GRAMD2AQ8IUY3 354 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 TMCO5AQ8N6Q1 288 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 OR52P1PQ8NH57 321 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 ZPLD1Q8TCW7 415 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 ITLN2Q8WWU7 325 aaPredicted RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 CNOT9Q92600 299 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms