RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ADAM5Q6NVV9 412 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 CBLN3Q6UW01 205 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 IFT20Q8IY31 132 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 ZNF614Q8N883 585 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 KISS1RQ969F8 398 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-202ENST00000463526 CPNE4Q96A23 557 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-202ENST00000463526 FAM120BQ96EK7 910 aaKnown RBP13.61□□□□□ -0.23
CMSS1-202ENST00000463526 METTL2AQ96IZ6 378 aaKnown RBP13.61□□□□□ -0.23
CMSS1-202ENST00000463526 TUBB1Q9H4B7 451 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 YAE1D1Q9NRH1 226 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 ACSS1Q9NUB1 689 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-202ENST00000463526 OXSMQ9NWU1 459 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 KLHL13Q9P2N7 655 aa13.61□□□□□ -0.23
CMSS1-202ENST00000463526 A0A1W2PNR3 127 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 DPRXA6NFQ7 191 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 TBX19O60806 448 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 HMGN2P05204 90 aaKnown RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 YES1P07947 543 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 ADH6P28332 368 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 LCN1P31025 176 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 FRKP42685 505 aaPredicted RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 BSPH1Q075Z2 132 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 PDE7AQ13946 482 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 ZNF672Q499Z4 452 aaPredicted RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 CDC73Q6P1J9 531 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 ZCCHC12Q6PEW1 402 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 BHLHA15Q7RTS1 189 aaPredicted RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 C10orf107Q8IVU9 208 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 OR7A2PQ8NGA2 310 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 OR2W6PQ8NHA6 318 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 ZNF764Q96H86 408 aaPredicted RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 FCRL1Q96LA6 429 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 SLCO5A1Q9H2Y9 848 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 COQ10BQ9H8M1 238 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 SIRT3Q9NTG7 399 aaPredicted RBP13.6□□□□□ -0.23
CMSS1-202ENST00000463526 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 PRSS50Q9UI38 385 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 KCNE3Q9Y6H6 103 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 ABCA1O95477 2261 aa13.6□□□□□ -0.23
CMSS1-202ENST00000463526 GJE1A6NN92 205 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 RNF212BA8MTL3 300 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 COPEO14579 308 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 RAMP1O60894 148 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ADAM11O75078 769 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 LYZL6O75951 148 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 CHEK2O96017 543 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 IGHV4-39P01824 125 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 NEFHP12036 1026 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 BCKDHAP12694 445 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ELK4P28324 431 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 CRHR1P34998 444 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 P2RX1P51575 399 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 CCR4P51679 360 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ITGADQ13349 1161 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 TP53BP2Q13625 1128 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 PGGHGQ32M88 737 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 EXOSC6Q5RKV6 272 aaKnown RBP13.59□□□□□ -0.23
CMSS1-202ENST00000463526 LIPMQ5VYY2 423 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 TMCO5AQ8N6Q1 288 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 PIWIL2Q8TC59 973 aaKnown RBP13.59□□□□□ -0.23
CMSS1-202ENST00000463526 GPR119Q8TDV5 335 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ZFP90Q8TF47 636 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ZNF524Q96C55 264 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 HS6ST2Q96MM7 605 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 RHOXF2Q9BQY4 288 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 GATA5Q9BWX5 397 aaPredicted RBP13.59□□□□□ -0.23
CMSS1-202ENST00000463526 PIGUQ9H490 435 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ALG2Q9H553 416 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 CXorf36Q9H7Y0 433 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 GDF2Q9UK05 429 aaPredicted RBP13.59□□□□□ -0.23
CMSS1-202ENST00000463526 CADP27708 2225 aa13.59□□□□□ -0.23
CMSS1-202ENST00000463526 FREM1Q5H8C1 2179 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 CHD3Q12873 2000 aaKnown RBP13.58□□□□□ -0.24
CMSS1-202ENST00000463526 TMEM233B4DJY2 109 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 H3BNH8 94 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
CMSS1-202ENST00000463526 HSPA4LO95757 839 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 SHBGP04278 402 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 LAMP1P11279 417 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 EDNRAP25101 427 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 SLC7A1P30825 629 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 ASMTP46597 345 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 CCT3P49368 545 aaKnown RBP13.58□□□□□ -0.24
CMSS1-202ENST00000463526 C21orf58P58505 322 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 P2RY6Q15077 328 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 ETFDHQ16134 617 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 KLHL26Q53HC5 615 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 DCST2Q5T1A1 773 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
CMSS1-202ENST00000463526 R3HCC1LQ7Z5L2 792 aaKnown RBP13.58□□□□□ -0.24
CMSS1-202ENST00000463526 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
CMSS1-202ENST00000463526 C4orf33Q8N1A6 199 aa13.58□□□□□ -0.24
CMSS1-202ENST00000463526 ZNF527Q8NB42 609 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms