RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 LOC105369274A0A096LPK9 316 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 TRDV1A0A1B0GX56 115 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 GABRR3A8MPY1 467 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 G3V3Q6 166 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 YY2O15391 372 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 VEGFDO43915 354 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 RNGTTO60942 597 aaKnown RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 NCR1O76036 304 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 RAB36O95755 333 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 TCRBP04435 133 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 NMBP08949 121 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 TFPIP10646 304 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 ELK1P19419 428 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 LCN1P31025 176 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 GABRA5P31644 462 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 GJA4P35212 333 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 FEN1P39748 380 aaKnown RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 RPL35P42766 123 aaKnown RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 SMSP52788 366 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 WNT4P56705 351 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 ITPRIPL2Q3MIP1 535 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 ZRANB3Q5FWF4 1079 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 ATXN7L2Q5T6C5 722 aaPredicted RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 TMEM215Q68D42 235 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 C12orf73Q69YU5 71 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 FCRLBQ6BAA4 426 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 NOXRED1Q6NXP6 359 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 CEACAM20Q6UY09 585 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 WDR53Q7Z5U6 358 aaPredicted RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 BCDIN3DQ7Z5W3 292 aaKnown RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 LINC00346Q8IVM7 164 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 OR4N4Q8N0Y3 316 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 BMPERQ8N8U9 685 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 OR8J1Q8NGP2 316 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 CXorf58Q96LI9 332 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 P2RY12Q9H244 342 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 ZCCHC4Q9H5U6 513 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 KCNK12Q9HB15 430 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 TESQ9UGI8 421 aaKnown RBP8.11□□□□□ -1.11
SHQ1-203ENST00000463369 LRRK1Q38SD2 2015 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 F5P12259 2224 aa8.11□□□□□ -1.11
SHQ1-203ENST00000463369 C1orf226A1L170 272 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 NPIPB8E9PQR5 432 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 PCDH7O60245 1069 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SELENOFO60613 162 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 IFNA14P01570 189 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 CLEC3BP05452 202 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 S100A9P06702 114 aaKnown RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 LPLP06858 475 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 NR2F6P10588 404 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 AMD1P17707 334 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 PPIBP23284 216 aaKnown RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 OPRD1P41143 372 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SLC6A11P48066 632 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 PTPN5P54829 565 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 HEPACAMQ14CZ8 416 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ST3GAL2Q16842 350 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 GSG1Q2KHT4 349 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 GPR33Q49SQ1 333 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 PABPC1L2AQ5JQF8 200 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ATRAIDQ6UW56 229 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 CASP12Q6UXS9 341 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 LINGO4Q6UY18 593 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 WASH2PQ6VEQ5 465 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF600Q6ZNG1 722 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 C17orf107Q6ZR85 190 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SLC44A3Q8N4M1 653 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 TCEANCQ8N8B7 351 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 WFIKKN2Q8TEU8 576 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 HSD17B8Q92506 261 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 OTULINQ96BN8 352 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 APOLD1Q96LR9 279 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ELF4Q99607 663 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 DPH7Q9BTV6 452 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 EDEM2Q9BV94 578 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 COA4Q9NYJ1 87 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 DEC1Q9P2X7 70 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 HS3ST2Q9Y278 367 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SCN8AQ9UQD0 1980 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 MPTX1A8MV57 137 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 AIPO00170 330 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 PDCD5O14737 125 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 APOC1P02654 83 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 LAMP1P11279 417 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 PEPDP12955 493 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 COX7A2P14406 83 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF3P17036 446 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 CTSOP43234 321 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 AKR1D1P51857 326 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 RAG2P55895 527 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF235Q14590 738 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 GANABQ14697 944 aaKnown RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 LTB4RQ15722 352 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 CCDC157Q569K6 752 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 OR2G6Q5TZ20 316 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 HACD4Q5VWC8 232 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 KLHL24Q6TFL4 600 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms