RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 TUBAL3A6NHL2 446 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 ADAMDEC1O15204 470 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 UGT2B17O75795 530 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 UBL4AP11441 157 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 H2AFXP16104 143 aaPredicted RBP20.67■□□□□ 0.9
PTPN4-208ENST00000460289 ELK4P28324 431 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 RNF144AP50876 292 aaPredicted RBP20.67■□□□□ 0.9
PTPN4-208ENST00000460289 LUZP2Q86TE4 346 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 TMEM200AQ86VY9 491 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 LILRA2Q8N149 483 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 CNEP1R1Q8N9A8 125 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 OR5W2Q8NH69 310 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 GPR119Q8TDV5 335 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 FAM222BQ8WU58 562 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 ROPN1LQ96C74 230 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 NPAS1Q99742 590 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 PRRG4Q9BZD6 226 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 LAT2Q9GZY6 243 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 SAP130Q9H0E3 1048 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 CRIM1Q9NZV1 1036 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 WDR45Q9Y484 360 aa20.67■□□□□ 0.9
PTPN4-208ENST00000460289 MYO9AB2RTY4 2548 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 A8MXE2 369 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 RFXANKO14593 260 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 MSTNO14793 375 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 OIP5O43482 229 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 HPCAP84074 193 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 CBFBQ13951 182 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 TYW3Q6IPR3 259 aaKnown RBP20.66■□□□□ 0.9
PTPN4-208ENST00000460289 EIF3MQ7L2H7 374 aaKnown RBP20.66■□□□□ 0.9
PTPN4-208ENST00000460289 RNF130Q86XS8 419 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 MIER2Q8N344 545 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 TMCO5AQ8N6Q1 288 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 OR10D3Q8NH80 312 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 RFWD2Q8NHY2 731 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 STARD4Q96DR4 205 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 ARSGQ96EG1 525 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 ADGRG7Q96K78 797 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 MARK4Q96L34 752 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 KLHDC3Q9BQ90 382 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 INPP5KQ9BT40 448 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 RMND5AQ9H871 391 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 KCNE5Q9UJ90 142 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 MCTS1Q9ULC4 181 aaKnown RBP20.66■□□□□ 0.9
PTPN4-208ENST00000460289 LIPT1Q9Y234 373 aa20.66■□□□□ 0.9
PTPN4-208ENST00000460289 MED12LQ86YW9 2145 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 GJE1A6NN92 205 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 HMGN4O00479 90 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 KIAA0513O60268 411 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 SYNGR4O95473 234 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 KRT75O95678 551 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 OPN1LWP04000 364 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 GSNP06396 782 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 CDKN2CP42773 168 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 MAGEA8P43361 318 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 FOXF1Q12946 379 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 GPAT3Q53EU6 434 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 MSANTD1Q6ZTZ1 278 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 ZNF619Q8N2I2 560 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 OR2V1Q8NHB1 315 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 FBXO27Q8NI29 283 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 MRGPRX4Q96LA9 322 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 TMEM185BQ9H7F4 350 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 SLCO1B3Q9NPD5 702 aa20.65■□□□□ 0.9
PTPN4-208ENST00000460289 INTS9Q9NV88 658 aaKnown RBP20.65■□□□□ 0.9
PTPN4-208ENST00000460289 PDZD2O15018 2839 aa20.64■□□□□ 0.9
PTPN4-208ENST00000460289 POLR3GO15318 223 aaPredicted RBP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 SMNDC1O75940 238 aaKnown RBP eCLIP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 CSTAP01040 98 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 PRKCAP17252 672 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 KIR2DL2P43627 348 aaPredicted RBP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 CCR4P51679 360 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 POLR2JP52435 117 aaKnown RBP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 PPP2R2AP63151 447 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 TOMM34Q15785 309 aaPredicted RBP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 CTU2Q2VPK5 515 aaKnown RBP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 NDUFAF6Q330K2 333 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 HBMQ6B0K9 141 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 PPP4R4Q6NUP7 873 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 OLIG3Q7RTU3 272 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 KLHL15Q96M94 604 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 TRNT1Q96Q11 434 aaKnown RBP20.64■□□□□ 0.89
PTPN4-208ENST00000460289 TIGARQ9NQ88 270 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 TCF7L2Q9NQB0 619 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 GALNT8Q9NY28 637 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 SLC35A3Q9Y2D2 325 aa20.64■□□□□ 0.89
PTPN4-208ENST00000460289 A0A0J9YW62 118 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 TNFSF11O14788 317 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 CXCL13O43927 109 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 CYP7B1O75881 506 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 ANP32DO95626 131 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 ZCCHC18P0CG32 403 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 EPXP11678 715 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 IL11P20809 199 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 CARD18P57730 90 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 STX1BP61266 288 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 FUT5Q11128 374 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 SKP2Q13309 424 aa20.63■□□□□ 0.89
PTPN4-208ENST00000460289 DAZAP2Q15038 168 aaPredicted RBP20.63■□□□□ 0.89
PTPN4-208ENST00000460289 SLC25A53Q5H9E4 307 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms