RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CTSSP25774 331 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 PSMA4P25789 261 aaKnown RBP18.69■□□□□ 0.58
VARS-218ENST00000459667 CRATP43155 626 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 MAGEA8P43361 318 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 ARFIP2P53365 341 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 MVDP53602 400 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 RPS3AP61247 264 aaKnown RBP18.69■□□□□ 0.58
VARS-218ENST00000459667 CHRNEQ04844 493 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 FOXF1Q12946 379 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 MAPK14Q16539 360 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 AGKQ53H12 422 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 MEX3BQ6ZN04 569 aaKnown RBP18.69■□□□□ 0.58
VARS-218ENST00000459667 P4HA3Q7Z4N8 544 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 TOR1AIP2Q8NFQ8 470 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 ZFP3Q96NJ6 502 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 SPOCK3Q9BQ16 436 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 TMEM120AQ9BXJ8 343 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 PINK1Q9BXM7 581 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 PAIP1Q9H074 479 aaKnown RBP18.69■□□□□ 0.58
VARS-218ENST00000459667 ENKD1Q9H0I2 346 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 SLC22A20A6NK97 555 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 RCBTB2O95199 551 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 TGM6O95932 706 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 CHRM4P08173 479 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 NR2F1P10589 423 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 EIF1P41567 113 aaKnown RBP18.68■□□□□ 0.58
VARS-218ENST00000459667 SKP2Q13309 424 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 CBFBQ13951 182 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 FGFBP1Q14512 234 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 TOMM34Q15785 309 aaPredicted RBP18.68■□□□□ 0.58
VARS-218ENST00000459667 AP1ARQ63HQ0 302 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 POMZP3Q6PJE2 187 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 LRRC74BQ6ZQY2 392 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 EIF3MQ7L2H7 374 aaKnown RBP18.68■□□□□ 0.58
VARS-218ENST00000459667 HMGN2P46Q86SG4 172 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 GGNQ86UU5 652 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 METTL25Q8N6Q8 603 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 ACBD4Q8NC06 268 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 OR5W2Q8NH69 310 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 GPR119Q8TDV5 335 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 LAT2Q9GZY6 243 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 SLC38A1Q9H2H9 487 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 PCDHB14Q9Y5E9 798 aa18.68■□□□□ 0.58
VARS-218ENST00000459667 GPC6Q9Y625 555 aaPredicted RBP18.68■□□□□ 0.58
VARS-218ENST00000459667 PKDREJQ9NTG1 2253 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 CRYBG3Q68DQ2 2970 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 CACNA1DQ01668 2161 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 INTS1Q8N201 2190 aaKnown RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 A0A096LPI6 279 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 EIF1AYO14602 144 aaKnown RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 UBTFL6P0CB48 400 aaPredicted RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 ETFAP13804 333 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 IGFBP2P18065 325 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 CAPN3P20807 821 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 ME2P23368 584 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 ELK4P28324 431 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 OPRM1P35372 400 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 ASCL1P50553 236 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 AGFG1P52594 562 aaKnown RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 DSTNP60981 165 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 RAC1P63000 192 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 FOXF2Q12947 444 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 MCEMP1Q8IX19 187 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 GCNT2Q8N0V5 402 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 FBXO27Q8NI29 283 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 FIG4Q92562 907 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 INTS12Q96CB8 462 aaKnown RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 ZG16BQ96DA0 208 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 ARSGQ96EG1 525 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 ZNF845Q96IR2 970 aaPredicted RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 QRSL1Q9H0R6 528 aaKnown RBP18.67■□□□□ 0.58
VARS-218ENST00000459667 TMEM185BQ9H7F4 350 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 SLC52A3Q9NQ40 469 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 P2RX2Q9UBL9 471 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 SLC35A3Q9Y2D2 325 aa18.67■□□□□ 0.58
VARS-218ENST00000459667 HEATR5AQ86XA9 2040 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 IL18BPO95998 194 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 PRKCAP17252 672 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 HOXB9P17482 250 aaPredicted RBP18.66■□□□□ 0.58
VARS-218ENST00000459667 ADH6P28332 368 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 PGM1P36871 562 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 PON3Q15166 354 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 QPRTQ15274 297 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 SGCBQ16585 318 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 LRIF1Q5T3J3 769 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 MED12LQ86YW9 2145 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 TREX2Q9BQ50 279 aaPredicted RBP18.66■□□□□ 0.58
VARS-218ENST00000459667 THUMPD3Q9BV44 507 aaKnown RBP18.66■□□□□ 0.58
VARS-218ENST00000459667 SFXN3Q9BWM7 321 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 RAD21L1Q9H4I0 556 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 ZNF385DQ9H6B1 395 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.66■□□□□ 0.58
VARS-218ENST00000459667 KLHL14Q9P2G3 628 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 ZNF175Q9Y473 711 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 CENPEQ02224 2701 aa18.66■□□□□ 0.58
VARS-218ENST00000459667 CELSR2Q9HCU4 2923 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 EEF1E1-BLOC1S5C9J1V9 151 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 CLIC1O00299 241 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 EEF1E1O43324 174 aaKnown RBP18.65■□□□□ 0.58
VARS-218ENST00000459667 OPN1LWP04000 364 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms