RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SFXN5Q8TD22 340 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 MOAP1Q96BY2 351 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 DUSP26Q9BV47 211 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 BHLHE41Q9C0J9 482 aaPredicted RBP14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 HOXD1Q9GZZ0 328 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 C12orf49Q9H741 205 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 RTTNQ86VV8 2226 aa14.1□□□□□ -0.15
CHCHD3-204ENST00000457942 HIVEP2P31629 2446 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 A0A0J9YW62 118 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 DEFB108AA8MXU0 73 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 SS18L1O75177 396 aaPredicted RBP14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 TUBBP07437 444 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 G6PDP11413 515 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 NID1P14543 1247 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 ZNF844Q08AG5 666 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 GUSBP1Q15486 140 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 CTU2Q2VPK5 515 aaKnown RBP14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 EXOSC6Q5RKV6 272 aaKnown RBP14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 BHLHB9Q6PI77 547 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 MTERF4Q7Z6M4 381 aaKnown RBP14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 ATP6V1C2Q8NEY4 427 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 OR5D16Q8NGK9 328 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 ADGRG7Q96K78 797 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 CCL19Q99731 98 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 CENPHQ9H3R5 247 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 TIGARQ9NQ88 270 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 GLRX2Q9NS18 164 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 NOP53Q9NZM5 478 aaKnown RBP14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 CARD8Q9Y2G2 431 aa14.09□□□□□ -0.15
CHCHD3-204ENST00000457942 GJE1A6NN92 205 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 RGS16O15492 202 aaPredicted RBP14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 SIAH2O43255 324 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 LINGO3P0C6S8 592 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 PABPC4LP0CB38 370 aaKnown RBP14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 IL11P20809 199 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 FPR1P21462 350 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 PSMA4P25789 261 aaKnown RBP14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 ELK4P28324 431 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 P2RX1P51575 399 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 CARD18P57730 90 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 RPS26P62854 115 aaKnown RBP14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 CHI3L2Q15782 390 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 NDUFAF6Q330K2 333 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 TMEM201Q5SNT2 666 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 CEP85LQ5SZL2 805 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 GTF2IRD2BQ6EKJ0 949 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 ALKBH2Q6NS38 261 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 GTF2IRD2Q86UP8 949 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 FBXO27Q8NI29 283 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 POC1BQ8TC44 478 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 ROBO4Q8WZ75 1007 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 OSTF1Q92882 214 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 PIGTQ969N2 578 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 COQ8BQ96D53 544 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 SLC35G5Q96KT7 338 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 ZIM3Q96PE6 472 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 OR7D2Q96RA2 312 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 KLHDC3Q9BQ90 382 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 GPATCH2Q9NW75 528 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 KCNE3Q9Y6H6 103 aa14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 ANK3Q12955 4377 aaKnown RBP14.08□□□□□ -0.16
CHCHD3-204ENST00000457942 HEATR5AQ86XA9 2040 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 RNF103-CHMP3A0A140T963 221 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 ADAMDEC1O15204 470 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 OIP5O43482 229 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 TYROBPO43914 113 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 CYP7B1O75881 506 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 SOX30O94993 753 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 SERPINE1P05121 402 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 PPP3CBP16298 524 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 AGTR1P30556 359 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 ATP12AP54707 1039 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 SUMO3P55854 103 aaPredicted RBP14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 HBA1P69905 142 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 ACKR1Q16570 336 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 ZNF239Q16600 458 aaKnown RBP14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 OR4F3Q6IEY1 312 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 CBLN3Q6UW01 205 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 BEND4Q6ZU67 534 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 WFDC8Q8IUA0 241 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 ZNF781Q8N8C0 355 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 TOR1AIP2Q8NFQ8 470 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 OR4A15Q8NGL6 344 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 PSMA8Q8TAA3 256 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 CPNE4Q96A23 557 aaPredicted RBP14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 HS3ST6Q96QI5 342 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 BDH2Q9BUT1 245 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 PLSCR4Q9NRQ2 329 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 PCDHGB4Q9UN71 923 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 DTNAQ9Y4J8 743 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 GPC6Q9Y625 555 aaPredicted RBP14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 DSCAMO60469 2012 aa14.07□□□□□ -0.16
CHCHD3-204ENST00000457942 NBEAL1Q6ZS30 2694 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 RNF212BA8MTL3 300 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 ZNF195O14628 629 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 ITM2AO43736 263 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 MYZAPP0CAP1 466 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 UBL4AP11441 157 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 MATN1P21941 496 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms