RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 MND1Q9BWT6 205 aa5□□□□□ -1.61
VPS41-209ENST00000457055 LRRC2Q9BYS8 371 aa5□□□□□ -1.61
VPS41-209ENST00000457055 NAT10Q9H0A0 1025 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 HRASLSQ9HDD0 168 aa5□□□□□ -1.61
VPS41-209ENST00000457055 FZD3Q9NPG1 666 aa5□□□□□ -1.61
VPS41-209ENST00000457055 PIGVQ9NUD9 493 aa5□□□□□ -1.61
VPS41-209ENST00000457055 LYARQ9NX58 379 aaKnown RBP5□□□□□ -1.61
VPS41-209ENST00000457055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5□□□□□ -1.61
VPS41-209ENST00000457055 ZNF532Q9HCE3 1301 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 RBBP6Q7Z6E9 1792 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SMIM31A0A1B0GVY4 71 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 A0A1W2PR48 441 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 LNP1A1A4G5 178 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 METTL21EPA6NDL7 271 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SAGE2PA6NJ88 616 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 EFCAB7A8K855 629 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ZNF785A8K8V0 405 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 A8MU76 341 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 M0R036 132 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 DFFAO00273 331 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 P2RY10O00398 339 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 RAB29O14966 203 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 INPP4BO15327 924 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 AQP9O43315 295 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SHOX2O60902 331 aaPredicted RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 ATP6V1G2O95670 118 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 CER1O95813 267 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 IGHV2-70P01814 119 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 PCCAP05165 728 aaPredicted RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 CA3P07451 260 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 NBEAP1P0C6P0 100 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SPATA31D3P0C874 917 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ARSAP15289 507 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 AMD1P17707 334 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 OGNP20774 298 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 DRD1P21728 446 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 MGAT1P26572 445 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ELK4P28324 431 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 CCR7P32248 378 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 KDELR2P33947 212 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ID1P41134 155 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 AQP2P41181 271 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 MTNR1AP48039 350 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 RPL14P50914 215 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 BLKP51451 505 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 VLDLRP98155 873 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 NHLH2Q02577 135 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 CKAP4Q07065 602 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 KRR1Q13601 381 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 MESDQ14696 234 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 TRIP13Q15645 432 aaPredicted RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 CCDC6Q16204 474 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 QRICH1Q2TAL8 776 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 BEAN1Q3B7T3 259 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ABLIM2Q6H8Q1 611 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ASPHD2Q6ICH7 369 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 OR52E8Q6IFG1 317 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 H3F3CQ6NXT2 135 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 BTNL3Q6UXE8 466 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SPATA31D4Q6ZUB0 917 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 MOB2Q70IA6 237 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 CENPUQ71F23 418 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SCD5Q86SK9 330 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 LYSMD2Q8IV50 215 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 PUSL1Q8N0Z8 303 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 MTURNQ8N3F0 131 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 LMNTD1Q8N9Z9 388 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 OR10S1Q8NGN2 331 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 AGAP11Q8TF27 550 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 DNAJB3Q8WWF6 145 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 NSMAFQ92636 917 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 NRGNQ92686 78 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 UFD1Q92890 307 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 RIT1Q92963 219 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ERGIC1Q969X5 290 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 FAM131CQ96AQ9 280 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SLC38A2Q96QD8 506 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 MTERF1Q99551 399 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 ABHD6Q9BV23 337 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 MECRQ9BV79 373 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 UCK2Q9BZX2 261 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 PPA2Q9H2U2 334 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 NARFLQ9H6Q4 476 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 KIR3DX1Q9H7L2 352 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 WDR41Q9HAD4 459 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 LMAN1LQ9HAT1 526 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 FSCN3Q9NQT6 498 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ENTPD7Q9NQZ7 604 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ADARB2Q9NS39 739 aaKnown RBP4.99□□□□□ -1.61
VPS41-209ENST00000457055 IMPAD1Q9NX62 359 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 GLS2Q9UI32 602 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 PRSS50Q9UI38 385 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 PHF11Q9UIL8 331 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 SERTAD3Q9UJW9 196 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 ICKQ9UPZ9 632 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 CMAHPQ9Y471 501 aa4.99□□□□□ -1.61
VPS41-209ENST00000457055 BRCA2P51587 3418 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 MROH7-TTC4A0A0A0MT08 1334 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms