RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 AGAP5A6NIR3 686 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 EVPLLA8MZ36 301 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 FAM47E-STBD1D6RA91 191 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 SLC22A2O15244 555 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 EPPINO95925 133 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 CSTAP01040 98 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 NUDT7P0C024 238 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 GLI4P10075 376 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF708P17019 499 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 GPX2P18283 190 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF41P51814 821 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-202ENST00000452372 CRISP3P54108 245 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 CLDN18P56856 261 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 NUP107P57740 925 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 GNA13Q14344 377 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 PLPPR5Q32ZL2 321 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 DHDDSQ86SQ9 333 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF295-AS1Q8N0V1 137 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 GTPBP8Q8N3Z3 284 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-202ENST00000452372 CCDC168Q8NDH2 2452 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 TOR1AIP2Q8NFQ8 470 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 OR5M1Q8NGP8 315 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 ZPLD1Q8TCW7 415 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 GPR119Q8TDV5 335 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 ARSGQ96EG1 525 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 KLHDC3Q9BQ90 382 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 NSRP1Q9H0G5 558 aaKnown RBP18.02■□□□□ 0.48
COL9A3-202ENST00000452372 QRSL1Q9H0R6 528 aaKnown RBP18.02■□□□□ 0.48
COL9A3-202ENST00000452372 IKZF5Q9H5V7 419 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 A4GALTQ9NPC4 353 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-202ENST00000452372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-202ENST00000452372 CORO2BQ9UQ03 480 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 SLC35A3Q9Y2D2 325 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 L3MBTL1Q9Y468 752 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 A0A0G2JPF8 293 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 HNRNPCL2B2RXH8 293 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 HNRNPCL3B7ZW38 293 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 FBP2O00757 339 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 HNRNPCL1O60812 293 aaKnown RBP18.01■□□□□ 0.47
COL9A3-202ENST00000452372 CCDC22O60826 627 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 BCHEP06276 602 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 LINGO3P0C6S8 592 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 HNRNPCL4P0DMR1 293 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 ZNF17P17021 662 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 DRD4P21917 467 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 RPS4Y1P22090 263 aaKnown RBP18.01■□□□□ 0.47
COL9A3-202ENST00000452372 PGM1P36871 562 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 GNGT1P63211 74 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 KCNJ10P78508 379 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 SKP2Q13309 424 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 MAPRE2Q15555 327 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 NDUFAF6Q330K2 333 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 ACSF3Q4G176 576 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-202ENST00000452372 COQ5Q5HYK3 327 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 FAM71CQ8NEG0 241 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 OR5W2Q8NH69 310 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 RND1Q92730 232 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 TMEM19Q96HH6 336 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 ANKRD27Q96NW4 1050 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 CGREF1Q99674 301 aa18.01■□□□□ 0.47
COL9A3-202ENST00000452372 TREX2Q9BQ50 279 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-202ENST00000452372 DSPPQ9NZW4 1301 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 SHISA8B8ZZ34 492 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 DNAJA2O60884 412 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 NUDT14O95848 222 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 DBIP07108 87 aaKnown RBP18■□□□□ 0.47
COL9A3-202ENST00000452372 PSMA4P25789 261 aaKnown RBP18■□□□□ 0.47
COL9A3-202ENST00000452372 EIF1P41567 113 aaKnown RBP18■□□□□ 0.47
COL9A3-202ENST00000452372 SRYQ05066 204 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 NFYCQ13952 458 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 PRAMEF8Q5VWM4 474 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 PRAMEF7Q5VXH5 474 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 HMGN2P46Q86SG4 172 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 CMIPQ8IY22 773 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 C10orf111Q8N326 155 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 POC1BQ8TC44 478 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 MAL2Q969L2 176 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 NPAS1Q99742 590 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 CPPED1Q9BRF8 314 aaPredicted RBP18■□□□□ 0.47
COL9A3-202ENST00000452372 TRIM8Q9BZR9 551 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 CALHM2Q9HA72 323 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 BCL2L10Q9HD36 194 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 COQ3Q9NZJ6 369 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 AP4B1Q9Y6B7 739 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 CAPN7Q9Y6W3 813 aa18■□□□□ 0.47
COL9A3-202ENST00000452372 LOC100653049A0A140TA62 436 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 CD8B2A6NJW9 211 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 BBIP1A8MTZ0 92 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 H0Y3Z8 333 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 SNX3O60493 162 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 KRT34O76011 436 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 CLDN14O95500 239 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 UBTFL6P0CB48 400 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-202ENST00000452372 IL7RP16871 459 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 POU3F2P20265 443 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-202ENST00000452372 ADH6P28332 368 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 CBFBQ13951 182 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 TOMM34Q15785 309 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms