RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ANKRD49Q8WVL7 239 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 MRRFQ96E11 262 aaKnown RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 FAHD2AQ96GK7 314 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 UBXN10Q96LJ8 280 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 CD244Q9BZW8 370 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 FAM53CQ9NYF3 392 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 CD274Q9NZQ7 290 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 ING1Q9UK53 422 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 TMCO1Q9UM00 188 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 OR10H1Q9Y4A9 318 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC25A15Q9Y619 301 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 TLDC2A0PJX2 215 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 SYCE1LA8MT33 242 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 KERAO60938 352 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 NME6O75414 186 aaPredicted RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 PIAS1O75925 651 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 KLHL2O95198 593 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 C2P06681 752 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 DDX5P17844 614 aaKnown RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 PGCP20142 388 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 CCT5P48643 541 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 PHEXP78562 749 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 MRPS35P82673 323 aaKnown RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 C17orf67Q0P5P2 114 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF460Q14592 562 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 TRIP10Q15642 601 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF239Q16600 458 aaKnown RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 CPTPQ5TA50 214 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 GRHL2Q6ISB3 625 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 NPSR1Q6W5P4 371 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 FCRLAQ7L513 359 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 GTPBP8Q8N3Z3 284 aaPredicted RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 BPIFB2Q8N4F0 458 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 TOR1AIP2Q8NFQ8 470 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 RHEBL1Q8TAI7 183 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 CPNE4Q96A23 557 aaPredicted RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 ZBTB8AQ96BR9 441 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 APOPT1Q96IL0 206 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 ATP6V1G3Q96LB4 118 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 LRRC37BQ96QE4 947 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC6A7Q99884 636 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 IQCGQ9H095 443 aaKnown RBP11□□□□□ -0.65
AC004540.1-204ENST00000449537 TMEM185BQ9H7F4 350 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 TMBIM4Q9HC24 238 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 FLRT3Q9NZU0 649 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 NTMQ9P121 344 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 TBK1Q9UHD2 729 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 DCDC2Q9UHG0 476 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 CES1P1Q9UKY3 287 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 PSME2Q9UL46 239 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 TSC22D4Q9Y3Q8 395 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 PCDHGA11Q9Y5H2 935 aa11□□□□□ -0.65
AC004540.1-204ENST00000449537 RYR3Q15413 4870 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 A0A087WZY1 265 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 IGLV3-32A0A0A0MS00 114 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 A0A1W2PR80 420 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 CIB4A0PJX0 185 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 PHGDHO43175 533 aaKnown RBP10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 RAD51DO75771 328 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 RBP1P09455 135 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 IFNGR1P15260 489 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 COX5AP20674 150 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 SERPINF1P36955 418 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC18A1P54219 525 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 IL13RA1P78552 427 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC18A2Q05940 514 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 CSTF3Q12996 717 aaKnown RBP10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 LTB4RQ15722 352 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 CCDC153Q494R4 210 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC48A1Q6P1K1 146 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 LRRC70Q7Z2Q7 622 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 CMC1Q7Z7K0 106 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 MYLK4Q86YV6 388 aaPredicted RBP10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 LILRA2Q8N149 483 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC43A2Q8N370 569 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF786Q8N393 782 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 CDYL2Q8N8U2 506 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 KLHL15Q96M94 604 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 VSTM2LQ96N03 204 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 ANKRA2Q9H9E1 313 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 CAB39LQ9H9S4 337 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 NTN4Q9HB63 628 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 LPAR2Q9HBW0 351 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 FAM120CQ9NX05 1096 aaKnown RBP10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 PPIAL4AQ9Y536 164 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 PCDHA9Q9Y5H5 950 aa10.99□□□□□ -0.65
AC004540.1-204ENST00000449537 LOC105371242A0A075B767 164 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 C1orf226A1L170 272 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 H3BQF6 201 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 FOXE1O00358 373 aaPredicted RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 COPEO14579 308 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 TM9SF1O15321 606 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 CLDN9O95484 217 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 KLK1P06870 262 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 MSMBP08118 114 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 CD1DP15813 335 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 KRT4P19013 534 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 PSMA4P25789 261 aaKnown RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 GCH1P30793 250 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms