RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PAQR8Q8TEZ7 354 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TM9SF4Q92544 642 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SPTSSAQ969W0 71 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF419Q96HQ0 510 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SNX18Q96RF0 628 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 NICN1Q9BSH3 213 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ST6GALNAC5Q9BVH7 336 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PLEKHJ1Q9NW61 149 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RBFOX1Q9NWB1 397 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 GLTPQ9NZD2 209 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SLAMF8Q9P0V8 285 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RHBDD3Q9Y3P4 386 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TSPAN11A1L157 253 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 MEIS3P1A6NDR6 274 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 FAM183AA6NL82 134 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 MEIS3P2A8K0S8 358 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 GABRPO00591 440 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ARHGAP33O14559 1287 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RAB6AP20340 208 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TRA2BP62995 288 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ECH1Q13011 328 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RAB31Q13636 194 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SELPLGQ14242 412 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 C6orf132Q5T0Z8 1188 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PIP5KL1Q5T9C9 394 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PRAMEF8Q5VWM4 474 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PRAMEF7Q5VXH5 474 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 MEX3DQ86XN8 651 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF679Q8IYX0 411 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 OR1S1Q8NH92 325 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SMAP2Q8WU79 429 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM40Q8WWA1 233 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TSACCQ96A04 125 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PDLIM5Q96HC4 596 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 FCRL1Q96LA6 429 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 SGCZQ96LD1 299 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 UHRF1Q96T88 793 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 CPPED1Q9BRF8 314 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ALOXE3Q9BYJ1 711 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TUBG2Q9NRH3 451 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 QPCTLQ9NXS2 382 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 NPAP1Q9NZP6 1156 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 BAZ2AQ9UIF9 1905 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 KRBOX1C9JBD0 128 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 PEX14O75381 377 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 JMJD7P0C870 316 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ARAFP10398 606 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF26P17031 533 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 IL32P24001 234 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 CHATP28329 748 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 POLR2IP36954 125 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ETV6P41212 452 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 BTN1A1Q13410 526 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ARHGAP19Q14CB8 494 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 DUSP7Q16829 419 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 OR2G6Q5TZ20 316 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 FAM69BQ5VUD6 431 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 IL17RDQ8NFM7 739 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TRMT2BQ96GJ1 504 aaKnown RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 LIN37Q96GY3 246 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 METTL17Q9H7H0 456 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 RPH3AQ9Y2J0 694 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-204ENST00000448183 ENTPD2Q9Y5L3 495 aa7.31□□□□□ -1.24
NEDD9-204ENST00000448183 TCRBV21S2A2A0A5A6 115 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 DRGXA6NNA5 263 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 LCATP04180 440 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 HLA-DMAP28067 261 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 GABRA5P31644 462 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 CX3CR1P49238 355 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 DAP3P51398 398 aaKnown RBP7.3□□□□□ -1.24
NEDD9-204ENST00000448183 HHEXQ03014 270 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 RAB33AQ14088 237 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 MBTPS1Q14703 1052 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 RAB30Q15771 203 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 SLC14A2Q15849 920 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 SLC5A12Q1EHB4 618 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 STEAP3Q658P3 488 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 NIPAL3Q6P499 406 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 SLC22A25Q6T423 547 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 B3GNT9Q6UX72 402 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 APOOLQ6UXV4 268 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 Q6ZNX1 250 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 PDZD3Q86UT5 571 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM151BQ8IW70 566 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 OR6V1Q8N148 313 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 SUMF2Q8NBJ7 301 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 OR4F15Q8NGB8 312 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 OR5D14Q8NGL3 314 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 NPRL2Q8WTW4 380 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 KIAA1143Q96AT1 154 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-204ENST00000448183 C3orf49Q96BT1 292 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 KIF25Q9UIL4 384 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF225Q9UK10 706 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 HEMK1Q9Y5R4 338 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-204ENST00000448183 MYO9BQ13459 2157 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 TTLL8A6PVC2 850 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 GPR39O43194 453 aa7.3□□□□□ -1.24
NEDD9-204ENST00000448183 SEC14L5O43304 696 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms