RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 IGLV3-32A0A0A0MS00 114 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 FAM166BA8MTA8 275 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 SYT5O00445 386 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 AP3D1O14617 1153 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 CDC40O60508 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 EIF4E2O60573 245 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 RFPL3SP0C7P2 107 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 TCEA1P23193 301 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 RYKP34925 604 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR1E2P47887 323 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 PLGLB1Q02325 96 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 ELOAQ14241 798 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 NRF1Q16656 503 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 SPATA24Q86W54 205 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 LSRQ86X29 649 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 CARM1Q86X55 608 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 RBM45Q8IUH3 476 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 GRAMD2AQ8IUY3 354 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 EID3Q8N140 333 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 FADS6Q8N9I5 356 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR52E4Q8NGH9 312 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 LZICQ8WZA0 190 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 ARHGDIGQ99819 225 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 PRR14Q9BWN1 585 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 TRIM15Q9C019 465 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 ARMC7Q9H6L4 198 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZFP64Q9NPA5 681 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 OLAHQ9NV23 265 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 KLHL28Q9NXS3 571 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 SAMD4AQ9UPU9 718 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 NTNG1Q9Y2I2 539 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 SH3GLB1Q9Y371 365 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 BSNQ9UPA5 3926 aa16.38■□□□□ 0.21
TRAPPC4-203ENST00000447216 NUDT14O95848 222 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 ENDOUP21128 410 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 P2RX1P51575 399 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZNF136P52737 540 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 RGS8P57771 180 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 IFI44LQ53G44 452 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 MTX3Q5HYI7 312 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 FKBP9P1Q75LS8 142 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 PNPLA2Q96AD5 504 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZNF524Q96C55 264 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 PYURFQ96I23 114 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 TTTY12Q9BZ98 90 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 EXOSC3Q9NQT5 275 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 ICAM5Q9UMF0 924 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 C15orf41Q9Y2V0 281 aa16.37■□□□□ 0.21
TRAPPC4-203ENST00000447216 CFAP73A6NFT4 308 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 C8BP07358 591 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 ACAA2P42765 397 aaKnown RBP16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 EPS8Q12929 822 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 CCNIQ14094 377 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 KPNB1Q14974 876 aaKnown RBP16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 TOMM34Q15785 309 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 NPTX1Q15818 432 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZSWIM7Q19AV6 140 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 RNFT1Q5M7Z0 435 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 ARSKQ6UWY0 536 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZNF440Q8IYI8 595 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 TEX19Q8NA77 164 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 Q8NA96 180 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZFP62Q8NB50 900 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 FAM98AQ8NCA5 519 aaKnown RBP16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR6T1Q8NGN1 323 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 OR5W2Q8NH69 310 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 TAAR6Q96RI8 345 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
TRAPPC4-203ENST00000447216 SPTA1P02549 2419 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 ANKUB1A6NFN9 424 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 AQP12BA6NM10 295 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 TPST2O60704 377 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 GLSO94925 669 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 RASAL1O95294 804 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 LINGO3P0C6S8 592 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 SFTPCP11686 197 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 ELAVL4P26378 380 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 GDF1P27539 372 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 MSX1P28360 303 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 PPIAP62937 165 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 TOMM20Q15388 145 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 ZNF550Q7Z398 422 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 AQP12AQ8IXF9 295 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 TMEM251Q8N6I4 163 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 TOR1AIP2Q8NFQ8 470 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 GPR119Q8TDV5 335 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 GEMIN6Q8WXD5 167 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 C1GALT1C1Q96EU7 318 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 SLC47A1Q96FL8 570 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 CTPS2Q9NRF8 586 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 DKKL1Q9UK85 242 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 VDAC3Q9Y277 283 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 SLC9A8Q9Y2E8 581 aa16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 PRRC2CQ9Y520 2896 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-203ENST00000447216 TCRBV3S1A0A5B6 114 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 SHISA8B8ZZ34 492 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 CBR3O75828 277 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 WISP1O95388 367 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 SEMG1P04279 462 aa16.34■□□□□ 0.21
TRAPPC4-203ENST00000447216 CELA3AP09093 270 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms