RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FGFBP1Q14512 234 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 SF3B4Q15427 424 aaKnown RBP eCLIP13.37□□□□□ -0.278e-6■■□□□ 11.6
HDAC4-204ENST00000446876 HSPB2Q16082 182 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 GGNQ86UU5 652 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 GTPBP8Q8N3Z3 284 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-204ENST00000446876 MEIOBQ8N635 442 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 GPR119Q8TDV5 335 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 ZBTB8AQ96BR9 441 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 ZNF845Q96IR2 970 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-204ENST00000446876 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
HDAC4-204ENST00000446876 CALHM2Q9HA72 323 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 HHATLQ9HCP6 504 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 CHST11Q9NPF2 352 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 KCNJ16Q9NPI9 418 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
HDAC4-204ENST00000446876 IL2RAP01589 272 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 BCHEP06276 602 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 NUDT7P0C024 238 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 TROVE2P10155 538 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC4-204ENST00000446876 SHC1P29353 583 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
HDAC4-204ENST00000446876 RPS26P11Q5JNZ5 115 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-204ENST00000446876 POMZP3Q6PJE2 187 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 GRAMD2AQ8IUY3 354 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 GCNT2Q8N0V5 402 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 OR5W2Q8NH69 310 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 FIG4Q92562 907 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 MARVELD3Q96A59 401 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 SIKE1Q9BRV8 207 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 THUMPD3Q9BV44 507 aaKnown RBP13.36□□□□□ -0.27
HDAC4-204ENST00000446876 PINK1Q9BXM7 581 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 TRIM33Q9UPN9 1127 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 LIPT1Q9Y234 373 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
HDAC4-204ENST00000446876 C7orf72A4D263 438 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 LINC01387J3KSC0 135 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 CLIC1O00299 241 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 EIF1AYO14602 144 aaKnown RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 ATP8B1O43520 1251 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 EFNA2O43921 213 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 EIF4E2O60573 245 aaKnown RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 GUSBP08236 651 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 TMIGD3P0DMS9 266 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 COX6B1P14854 86 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 PRKCAP17252 672 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 PGM1P36871 562 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 MDH1P40925 334 aaKnown RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 SUMO3P55854 103 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 TXNL4AP83876 142 aaKnown RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 QPRTQ15274 297 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 LRIF1Q5T3J3 769 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 CRYBG3Q68DQ2 2970 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 LRRC74BQ6ZQY2 392 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 EIF3MQ7L2H7 374 aaKnown RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 CHMP1BQ7LBR1 199 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 P4HA3Q7Z4N8 544 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 C10orf111Q8N326 155 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 FAM71CQ8NEG0 241 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 TOR1AIP2Q8NFQ8 470 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 WNT2BQ93097 391 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 MAL2Q969L2 176 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 INTS12Q96CB8 462 aaKnown RBP13.35□□□□□ -0.27
HDAC4-204ENST00000446876 LAT2Q9GZY6 243 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 RABEP2Q9H5N1 569 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 IKZF5Q9H5V7 419 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 CCDC134Q9H6E4 229 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 VAPAQ9P0L0 249 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 P2RX2Q9UBL9 471 aa13.35□□□□□ -0.27
HDAC4-204ENST00000446876 UNC79Q9P2D8 2635 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TRBV5-3A0A0A0MS03 114 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 A0A0J9YW62 118 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 A0A1W2PP18 115 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 SLC22A20A6NK97 555 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TNFSF11O14788 317 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 HNRNPRO43390 633 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 ADAM11O75078 769 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TFPTP0C1Z6 253 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 PRF1P14222 555 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 RPS4Y1P22090 263 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 CTSSP25774 331 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 SFTPDP35247 375 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 EIF1AXP47813 144 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 ARFIP2P53365 341 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 IRX1P78414 480 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 SNTB1Q13884 538 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 CBFBQ13951 182 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 PON3Q15166 354 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 RGNQ15493 299 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 SLC25A35Q3KQZ1 300 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 MEX3BQ6ZN04 569 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 RETREG3Q86VR2 466 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 METTL25Q8N6Q8 603 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 ATP6V1C2Q8NEY4 427 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 FNDC9Q8TBE3 224 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 SLC38A5Q8WUX1 472 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms