RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 FFAR1O14842 300 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 OR10H3O60404 316 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 FCMRO60667 390 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 C1QL1O75973 258 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ADAP00813 363 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CBLP22681 906 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RYKP34925 604 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 TRHRP34981 398 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RFX3P48380 749 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CD97P48960 835 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CLK3P49761 638 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NR1H2P55055 460 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 TUBA4AP68366 448 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NFATC3Q12968 1075 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 DUSP8Q13202 625 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ELAVL1Q15717 326 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 FLYWCH1Q4VC44 716 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RANBP3LQ86VV4 465 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 PTPMT1Q8WUK0 201 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 HOXB13Q92826 284 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 GTPBP3Q969Y2 492 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ART5Q96L15 291 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 PITX2Q99697 317 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 SLC25A18Q9H1K4 315 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 OR10A5Q9H207 317 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 MMP25Q9NPA2 562 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 A4GNTQ9UNA3 340 aa13.38□□□□□ -0.27
TNFRSF1A-204ENST00000440083 TRBV11-1A0A0K0K1C0 115 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 A0A1W2PRQ8 180 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 AGAP5A6NIR3 686 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CPSF4LA6NMK7 179 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 DDAH2O95865 285 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 EPPINO95925 133 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 F10P00742 488 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 S1PR1P21453 382 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RPS4Y1P22090 263 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ELK4P28324 431 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 POLR2IP36954 125 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 IFNGR2P38484 337 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 MAP3K8P41279 467 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 EMDP50402 254 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 PSMD4P55036 377 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 GABARAPL2P60520 117 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CD47Q08722 323 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 PIN1Q13526 163 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 DGCR6Q14129 220 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 TRAM2Q15035 370 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 EXT1Q16394 746 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 COMTD1Q86VU5 262 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 M1APQ8TC57 530 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 SLC38A4Q969I6 547 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 MCHR1Q99705 422 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 SMAD5Q99717 465 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NIPSNAP1Q9BPW8 284 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 G6PC3Q9BUM1 346 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 MFRPQ9BY79 579 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 UCK2Q9BZX2 261 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 POLR2J2Q9GZM3 115 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 OR8D2Q9GZM6 311 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 SAP130Q9H0E3 1048 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 POLR2J3Q9H1A7 115 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RLIMQ9NVW2 624 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NDUFA13Q9P0J0 144 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CFL2Q9Y281 166 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 OR10H1Q9Y4A9 318 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CSAG2Q9Y5P2 127 aa13.37□□□□□ -0.27
TNFRSF1A-204ENST00000440083 BSNQ9UPA5 3926 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CPAMD8Q8IZJ3 1885 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NPIPA5A0A0B4J1W7 369 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 SMIM31A0A1B0GVY4 71 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NPIPA7E9PJI5 369 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 FRS3O43559 492 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 PRKNO60260 465 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 KCNK2O95069 426 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 GUSBP08236 651 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NPIPA8P0DM63 369 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NID1P14543 1247 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 HLCSP50747 726 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 GPR143P51810 404 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 CDH15P55291 814 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 EEF1A1P68104 462 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RPP38P78345 283 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 FUT7Q11130 342 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ST3GAL3Q11203 375 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 NPTX1Q15818 432 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 MEP1AQ16819 746 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 AGAP7PQ5VUJ5 663 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 PARP8Q8N3A8 854 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ZNF614Q8N883 585 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 APCDD1LQ8NCL9 501 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 B3GNT7Q8NFL0 401 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 OR14A16Q8NHC5 309 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 SLC2A12Q8TD20 617 aa13.36□□□□□ -0.27
TNFRSF1A-204ENST00000440083 ELP5Q8TE02 316 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms