RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ARAFP10398 606 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 NID1P14543 1247 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 IL7RP16871 459 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 POU3F2P20265 443 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 TCEA1P23193 301 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 STARP49675 285 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 RNF144AP50876 292 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 NUP107P57740 925 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 PMPCAQ10713 525 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 TRMT5Q32P41 509 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 MMEL1Q495T6 779 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 RIPPLY2Q5TAB7 128 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 NSUN5P2Q63ZY6 315 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 LACC1Q8IV20 430 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 MEIOBQ8N635 442 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 TMCO5AQ8N6Q1 288 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 PCYOX1LQ8NBM8 494 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 OR5M1Q8NGP8 315 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 RP9Q8TA86 221 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 BBS10Q8TAM1 723 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 WDR60Q8WVS4 1066 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 ASB5Q8WWX0 329 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 UCN2Q96RP3 112 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 SH3GL1Q99961 368 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 THUMPD3Q9BV44 507 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 FAM107BQ9H098 131 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 QRSL1Q9H0R6 528 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 IKZF5Q9H5V7 419 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 TMEM38AQ9H6F2 299 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 CACYBPQ9HB71 228 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 EXOSC3Q9NQT5 275 aaKnown RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 FAM53CQ9NYF3 392 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF232Q9UNY5 417 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF337Q9Y3M9 751 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 DNAJC13O75165 2243 aa10.68□□□□□ -0.7
HSPG2-206ENST00000439717 USP9XQ93008 2570 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-206ENST00000439717 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 LOC100653049A0A140TA62 436 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 H3BML4 177 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ETV2O00321 342 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-206ENST00000439717 MRASO14807 208 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 CYP7B1O75881 506 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 KRT34O76011 436 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 PGM3O95394 542 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 NUDT7P0C024 238 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 UBTFL6P0CB48 400 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ETS2P15036 469 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 PGCP20142 388 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 PSMA4P25789 261 aaKnown RBP10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ELK4P28324 431 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 TIMP3P35625 211 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 SLC6A8P48029 635 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 CCR4P51679 360 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 RAC1P63000 192 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 SRYQ05066 204 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ART3Q13508 389 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 LARS2Q15031 903 aaKnown RBP10.67□□□□□ -0.7
HSPG2-206ENST00000439717 NDUFAF6Q330K2 333 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 LIN52Q52LA3 116 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 SLC25A53Q5H9E4 307 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 REP15Q6BDI9 236 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 REEP3Q6NUK4 255 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 NCCRP1Q6ZVX7 275 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ADGRE4PQ86SQ3 457 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 MTDHQ86UE4 582 aaKnown RBP10.67□□□□□ -0.7
HSPG2-206ENST00000439717 SNX32Q86XE0 403 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 RPRMLQ8N4K4 120 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 OR52P1PQ8NH57 321 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 POC1BQ8TC44 478 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 TMEM234Q8WY98 164 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ST8SIA1Q92185 356 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 MAL2Q969L2 176 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 LRRC58Q96CX6 371 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 MRGPRX4Q96LA9 322 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 RNF145Q96MT1 663 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 TUBA1CQ9BQE3 449 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 CCDC106Q9BWC9 280 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ARMC7Q9H6L4 198 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 GID8Q9NWU2 228 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 ARMCX1Q9P291 453 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 IFT52Q9Y366 437 aa10.67□□□□□ -0.7
HSPG2-206ENST00000439717 FREM3P0C091 2139 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 CDHR4A6H8M9 788 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MBD3L4A6NDZ8 208 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MBD3L3A6NE82 208 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MBD3L5A6NJ08 208 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 HSPB2A8KAH6 182 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SHISA8B8ZZ34 492 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 NTN1O95631 604 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 PRKCAP17252 672 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 ME2P23368 584 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SLC6A2P23975 617 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 CHRNB4P30926 498 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 DLX5P56178 289 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MTPNP58546 118 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 CDK6Q00534 326 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 RBBP4Q09028 425 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 QPRTQ15274 297 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 HSPB2Q16082 182 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms