RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FASP25445 335 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 GABRR2P28476 465 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 KRT20P35900 424 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 RAB28P51157 221 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 RIPK4P57078 832 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 RPS6P62753 249 aaKnown RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 IFI35P80217 286 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 BMP2KLQ5H9B9 411 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 TEX35Q5T0J7 233 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 ERMARDQ5T6L9 678 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 WSCD1Q658N2 575 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 KRT39Q6A163 491 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 CASC1Q6TDU7 716 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 PIGWQ7Z7B1 504 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 CREBRFQ8IUR6 639 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 PRSS35Q8N3Z0 413 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 TEX26Q8N6G2 289 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 PHF10Q8WUB8 498 aaKnown RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 GTSF1Q8WW33 167 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 CNDP1Q96KN2 507 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 ALKBH3Q96Q83 286 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 RAB3IPQ96QF0 476 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 TNFRSF13CQ96RJ3 184 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 DEFB126Q9BYW3 111 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 FNDC4Q9H6D8 234 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 XAB2Q9HCS7 855 aaKnown RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF275Q9NSD4 429 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 ARGLU1Q9NWB6 273 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 HYPKQ9NX55 129 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 VPS18Q9P253 973 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 RSPH14Q9UHP6 348 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 CLEC4EQ9ULY5 219 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 MGAT4AQ9UM21 535 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 LRP1BQ9NZR2 4599 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 MYO5AQ9Y4I1 1855 aaKnown RBP1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 PTPRJQ12913 1337 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 MYH9P35579 1960 aaKnown RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 NUP210LQ5VU65 1888 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 TRAV9-2A0A087WT02 112 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 A8MXE2 369 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 H3BMM5 538 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 CCDC188H7C350 402 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ADAM20O43506 726 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 STK17BO94768 372 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 MT-ND2P03891 347 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ADRB2P07550 413 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ERCC2P18074 760 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 GPX3P22352 226 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 RPL9P32969 192 aaKnown RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 VLDLRP98155 873 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ACSM1Q08AH1 577 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ECSCRQ19T08 205 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 DEFB133Q30KQ1 61 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 TWF2Q6IBS0 349 aaKnown RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ARMCX5Q6P1M9 558 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 PLBD1Q6P4A8 553 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 PRUNE1Q86TP1 453 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 MFN1Q8IWA4 741 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 CMTM8Q8IZV2 173 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 XXYLT1Q8NBI6 393 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 RELL2Q8NC24 303 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF461Q8TAF7 563 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 PGAP3Q96FM1 320 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 LINC00615Q96LM1 132 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 GABRG3Q99928 467 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 MAPKAP1Q9BPZ7 522 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 EDEM3Q9BZQ6 932 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 LRRN3Q9H3W5 708 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 PHPT1Q9NRX4 125 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 VNN3Q9NY84 501 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 NFKBIL1Q9UBC1 381 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF282Q9UDV7 671 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 ODF2LQ9ULJ1 636 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 CCL27Q9Y4X3 112 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 CPQQ9Y646 472 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 FANCIQ9NVI1 1328 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 MYH10P35580 1976 aa1.89□□□□□ -2.11
HMGB1P18-201ENST00000438801 NYNRINQ9P2P1 1898 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 BAZ2AQ9UIF9 1905 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 TEX48A0A1B0GUV7 120 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 LOC390937A0A1W2PQ73 354 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 GTPBP10A4D1E9 387 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 TSPY2A6NKD2 308 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 LMO7DNF2Z398 122 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 FBP2O00757 339 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 UBE2CO00762 179 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 TNFSF11O14788 317 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 PALMO75781 387 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 PDE5AO76074 875 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 RECQL5O94762 991 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 FGF19O95750 216 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 DNTTP04053 509 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 OR52Z1P0C646 297 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 GOT1P17174 413 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 EPORP19235 508 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 CTNNA2P26232 953 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 MEOX2P50222 304 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 RAD23AP54725 363 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 WASHC5Q12768 1159 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms