RNA–Protein interactions for RNA: ENST00000433436.6

CLTA-204, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-204ENST00000433436 LAT2Q9GZY6 243 aa20.81■□□□□ 0.92
CLTA-204ENST00000433436 RAD21L1Q9H4I0 556 aa20.81■□□□□ 0.92
CLTA-204ENST00000433436 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.81■□□□□ 0.92
CLTA-204ENST00000433436 AP4B1Q9Y6B7 739 aa20.81■□□□□ 0.92
CLTA-204ENST00000433436 CLDN24A6NM45 220 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 DYNC1I1O14576 645 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 BCAS1O75363 584 aaPredicted RBP20.8■□□□□ 0.92
CLTA-204ENST00000433436 OPN1LWP04000 364 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 BCHEP06276 602 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 SNRPB2P08579 225 aaKnown RBP20.8■□□□□ 0.92
CLTA-204ENST00000433436 ZNF17P17021 662 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 TIMP3P35625 211 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 CLDN15P56746 228 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 KCNJ10P78508 379 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 SKP2Q13309 424 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 SP5Q6BEB4 398 aaPredicted RBP20.8■□□□□ 0.92
CLTA-204ENST00000433436 OIT3Q8WWZ8 545 aa20.8■□□□□ 0.92
CLTA-204ENST00000433436 THUMPD3Q9BV44 507 aaKnown RBP20.8■□□□□ 0.92
CLTA-204ENST00000433436 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.8■□□□□ 0.92
CLTA-204ENST00000433436 THUMPD1Q9NXG2 353 aaKnown RBP20.8■□□□□ 0.92
CLTA-204ENST00000433436 C7orf72A4D263 438 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 NKX2-6A6NCS4 301 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 TMEM247A6NEH6 219 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 AGAP5A6NIR3 686 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 HSPB2A8KAH6 182 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 IL2RAP01589 272 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 PSMA4P25789 261 aaKnown RBP20.79■□□□□ 0.92
CLTA-204ENST00000433436 PGM1P36871 562 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 FOXF1Q12946 379 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 FADDQ13158 208 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 CBFBQ13951 182 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 HSPB2Q16082 182 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 DLEU7Q6UYE1 221 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 RETREG3Q86VR2 466 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 LIX1LQ8IVB5 337 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 C9orf106Q8NAJ2 232 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 NAXEQ8NCW5 288 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 MAL2Q969L2 176 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 ZNF524Q96C55 264 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 TMEM185BQ9H7F4 350 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 SAR1AQ9NR31 198 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 CALML5Q9NZT1 146 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 STOML1Q9UBI4 398 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 SLC35A3Q9Y2D2 325 aa20.79■□□□□ 0.92
CLTA-204ENST00000433436 TRBV5-3A0A0A0MS03 114 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 MBD3L4A6NDZ8 208 aaPredicted RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 MBD3L3A6NE82 208 aaPredicted RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 MBD3L5A6NJ08 208 aaPredicted RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 IL11P20809 199 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 PPIBP23284 216 aaKnown RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 CEACAM8P31997 349 aaPredicted RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 EIF1P41567 113 aaKnown RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 CRISP3P54108 245 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 GYS2P54840 703 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 EEFSECP57772 596 aaKnown RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 QPRTQ15274 297 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 RPS26P11Q5JNZ5 115 aaPredicted RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 ADGRE4PQ86SQ3 457 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 MBD3L2Q8NHZ7 208 aaPredicted RBP20.78■□□□□ 0.92
CLTA-204ENST00000433436 FBXO27Q8NI29 283 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 TSPEARQ8WU66 669 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 C10orf82Q8WW14 230 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 TMEM19Q96HH6 336 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 IKZF5Q9H5V7 419 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 KCNJ16Q9NPI9 418 aa20.78■□□□□ 0.92
CLTA-204ENST00000433436 KIAA1549Q9HCM3 1950 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 EVPLLA8MZ36 301 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 C19orf84I3L1E1 186 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 DBIP07108 87 aaKnown RBP20.77■□□□□ 0.92
CLTA-204ENST00000433436 IL7RP16871 459 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 PRKCAP17252 672 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 SEC24CP53992 1094 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 KLF10Q13118 480 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 GNA13Q14344 377 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 ZNF787Q6DD87 383 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 DHDDSQ86SQ9 333 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 GGNQ86UU5 652 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 GRAMD2AQ8IUY3 354 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 PEX5LQ8IYB4 626 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 C10orf111Q8N326 155 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 FAM71CQ8NEG0 241 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 WDR60Q8WVS4 1066 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 CNOT9Q92600 299 aaKnown RBP20.77■□□□□ 0.92
CLTA-204ENST00000433436 PMM1Q92871 262 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 TREX2Q9BQ50 279 aaPredicted RBP20.77■□□□□ 0.92
CLTA-204ENST00000433436 A4GALTQ9NPC4 353 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 CHST11Q9NPF2 352 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 CLCF1Q9UBD9 225 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 GPC6Q9Y625 555 aaPredicted RBP20.77■□□□□ 0.92
CLTA-204ENST00000433436 ARHGAP21Q5T5U3 1957 aa20.77■□□□□ 0.92
CLTA-204ENST00000433436 EIF1AYO14602 144 aaKnown RBP20.76■□□□□ 0.91
CLTA-204ENST00000433436 BMP2P12643 396 aa20.76■□□□□ 0.91
CLTA-204ENST00000433436 RPS4Y1P22090 263 aaKnown RBP20.76■□□□□ 0.91
CLTA-204ENST00000433436 ME2P23368 584 aa20.76■□□□□ 0.91
CLTA-204ENST00000433436 RYKP34925 604 aa20.76■□□□□ 0.91
CLTA-204ENST00000433436 AGFG1P52594 562 aaKnown RBP20.76■□□□□ 0.91
CLTA-204ENST00000433436 RAC1P63000 192 aa20.76■□□□□ 0.91
CLTA-204ENST00000433436 NFYCQ13952 458 aa20.76■□□□□ 0.91
CLTA-204ENST00000433436 RUNDC3AQ59EK9 446 aa20.76■□□□□ 0.91
CLTA-204ENST00000433436 GCNT6Q5T4J0 391 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms