RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TPSAB1Q15661 275 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 PYHIN1Q6K0P9 492 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 FAM71F2Q6NXP2 309 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 UTS2BQ765I0 119 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 ZCCHC7Q8N3Z6 543 aaKnown RBP4.67□□□□□ -1.66
USP54-206ENST00000433394 EIF1ADQ8N9N8 165 aaKnown RBP4.67□□□□□ -1.66
USP54-206ENST00000433394 OR2T33Q8NG76 320 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 PCSK1NQ9UHG2 260 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 LCMT1Q9UIC8 334 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 CLEC4AQ9UMR7 237 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 KDRP35968 1356 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 SAMD9Q5K651 1589 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 VPS8Q8N3P4 1428 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 ESYT2A0FGR8 921 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 E7ESA3 106 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 PHF1O43189 567 aaPredicted RBP4.66□□□□□ -1.66
USP54-206ENST00000433394 NOL4O94818 638 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 F10P00742 488 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 RNH1P13489 461 aaKnown RBP4.66□□□□□ -1.66
USP54-206ENST00000433394 ANXA13P27216 316 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 SLC25A1P53007 311 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 SLC10A7Q0GE19 358 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 MXD4Q14582 209 aaPredicted RBP4.66□□□□□ -1.66
USP54-206ENST00000433394 QRICH1Q2TAL8 776 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 BEND3Q5T5X7 828 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 MARC1Q5VT66 337 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 ZNF57Q68EA5 555 aaPredicted RBP4.66□□□□□ -1.66
USP54-206ENST00000433394 PVRIGQ6DKI7 326 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 EFL1Q7Z2Z2 1120 aaKnown RBP4.66□□□□□ -1.66
USP54-206ENST00000433394 TPRA1Q86W33 373 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 ZNF679Q8IYX0 411 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 SLC38A6Q8IZM9 456 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 BHLHE23Q8NDY6 225 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 OR9A4Q8NGU2 314 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 CCDC26Q8TAB7 109 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 FAM222BQ8WU58 562 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 TCTEX1D2Q8WW35 142 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 RBM14Q96PK6 669 aaKnown RBP4.66□□□□□ -1.66
USP54-206ENST00000433394 EDEM2Q9BV94 578 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 TM2D1Q9BX74 207 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 TSSK1BQ9BXA7 367 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 UFSP2Q9NUQ7 469 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 NUDT15Q9NV35 164 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 PPIAL4AQ9Y536 164 aa4.66□□□□□ -1.66
USP54-206ENST00000433394 DHRS7CA6NNS2 312 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 SAP18O00422 153 aaKnown RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 BTN3A3O00478 584 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 FCN1O00602 326 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 SNNO75324 88 aaPredicted RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 ZNF253O75346 499 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 PGK1P00558 417 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 EPHX2P34913 555 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 AIF1P55008 147 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 LAGE3Q14657 143 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 TIMM50Q3ZCQ8 353 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 GLYR1Q49A26 553 aaPredicted RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 EIPR1Q53HC9 387 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 OR5M10Q6IEU7 315 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 NLRP9Q7RTR0 991 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 SERPINA9Q86WD7 417 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 CLEC4FQ8N1N0 589 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 FAM3CQ92520 227 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 MRPS31Q92665 395 aaKnown RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 RPL3LQ92901 407 aaKnown RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 AMDHD1Q96NU7 426 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 ATOH8Q96SQ7 321 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 GCOM2Q9BZD3 368 aaPredicted RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 ISG20L2Q9H9L3 353 aaKnown RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 SLC17A5Q9NRA2 495 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 ZNF221Q9UK13 617 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 CDH9Q9ULB4 789 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 RRP15Q9Y3B9 282 aaKnown RBP4.65□□□□□ -1.67
USP54-206ENST00000433394 L3MBTL1Q9Y468 752 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 METP08581 1390 aa4.65□□□□□ -1.67
USP54-206ENST00000433394 FYCO1Q9BQS8 1478 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 ARHGAP35Q9NRY4 1499 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 A0A1B0GU03 582 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 SMIM28A0A1B0GU29 152 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 G3V4G9 280 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 H3BMQ9 156 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 GOLGA8SH3BPF8 625 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 TBX6O95947 436 aaPredicted RBP4.64□□□□□ -1.67
USP54-206ENST00000433394 IGHDP01880 384 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 PNMTP11086 282 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 IMPDH1P20839 514 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 IGHV1-2P23083 117 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 NMT1P30419 496 aaKnown RBP4.64□□□□□ -1.67
USP54-206ENST00000433394 PRKAR2BP31323 418 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 GRIA1P42261 906 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 TDO2P48775 406 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 PAX2Q02962 417 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 LRRC74AQ0VAA2 488 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 ASAH1Q13510 395 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 SLC5A12Q1EHB4 618 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 GGTA1PQ4G0N0 100 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 PAGE2BQ5JRK9 111 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 LIPNQ5VXI9 398 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 RNLSQ5VYX0 342 aa4.64□□□□□ -1.67
USP54-206ENST00000433394 SLC22A10Q63ZE4 541 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms