RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 RAB40BQ12829 278 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 FAM205BPQ63HN1 556 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SFRP4Q6FHJ7 346 aaPredicted RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 SIGIRRQ6IA17 410 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 LINGO2Q7L985 606 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 MAMDC2Q7Z304 686 aaPredicted RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 SRFBP1Q8NEF9 429 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 OR7G1Q8NGA0 311 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 OR13C2Q8NGS9 318 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 FGF13Q92913 245 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 DCLRE1CQ96SD1 692 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 ZNF559Q9BR84 538 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 COL25A1Q9BXS0 654 aaPredicted RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 OR52D1Q9H346 318 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CDCP1Q9H5V8 836 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SCPEP1Q9HB40 452 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 V9GYH0 126 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PLXNA3P51805 1871 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 A0A0G2JPF8 293 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 IRGMA1A4Y4 181 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 HNRNPCL3B7ZW38 293 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 H0Y8X5 98 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 NUDT14O95848 222 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 LGI1O95970 557 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SYPP08247 313 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 HNRNPCL4P0DMR1 293 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 DRD2P14416 443 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SSTR2P30874 369 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 ACSL1P33121 698 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 LTBRP36941 435 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PSMB10P40306 273 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SOX2P48431 317 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 HMGA2P52926 109 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 RPP30P78346 268 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 MAB21L1Q13394 359 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 AGERQ15109 404 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 FLYWCH1Q4VC44 716 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PRRT3Q5FWE3 981 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CLEC2AQ6UVW9 174 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 OAFQ86UD1 273 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 KIF18BQ86Y91 864 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 TOMM5Q8N4H5 51 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 ZNF565Q8N9K5 539 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 OR4K14Q8NGD5 310 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PFN4Q8NHR9 129 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 RSPRY1Q96DX4 576 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PTCHD1Q96NR3 888 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 GPR174Q9BXC1 333 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 GSDMCQ9BYG8 508 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 MIXL1Q9H2W2 232 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 TMEM27Q9HBJ8 222 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PRSS16Q9NQE7 514 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 MRPL39Q9NYK5 338 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 EIF3KQ9UBQ5 218 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 GNG8Q9UK08 70 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 NCKAP1Q9Y2A7 1128 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 AK6Q9Y3D8 172 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 STON1Q9Y6Q2 735 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 TANC1Q9C0D5 1861 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PEX12O00623 359 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 GPR37O15354 613 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 NOS1APO75052 506 aaPredicted RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 MOSPD3O75425 235 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 FGF19O95750 216 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 HMGN1P05114 100 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SHC2P98077 582 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CDK10Q15131 360 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 LPAL2Q16609 132 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 NTRK2Q16620 822 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PGGHGQ32M88 737 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 TRMT12Q53H54 448 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 METRNLQ641Q3 311 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 FRRS1Q6ZNA5 592 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 BMP8AQ7Z5Y6 402 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PRSS58Q8IYP2 241 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 TMEM99Q8N816 258 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SDR9C7Q8NEX9 313 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CCL4L1Q8NHW4 92 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 GRPEL2Q8TAA5 225 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 GCDHQ92947 438 aaPredicted RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 RFT1Q96AA3 541 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 OTUB2Q96DC9 234 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 SIGLEC11Q96RL6 698 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 NDC1Q9BTX1 674 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PPIL3Q9H2H8 161 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 PELI2Q9HAT8 420 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 TRIM36Q9NQ86 728 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CALML5Q9NZT1 146 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 IKZF2Q9UKS7 526 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 ING4Q9UNL4 249 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 FNDC1Q4ZHG4 1894 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 SPTA1P02549 2419 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 AHCTF1Q8WYP5 2266 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 C17orf113A0A1B0GUU1 675 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR2W5A6NFC9 320 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 DUXAA6NLW8 204 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 A8MVJ9 347 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 B3GALT2O43825 422 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms