RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 BCL2L10Q9HD36 194 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ACKR4Q9NPB9 350 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SDHAF3Q9NRP4 125 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 OLAHQ9NV23 265 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 THUMPD1Q9NXG2 353 aaKnown RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 QPCTLQ9NXS2 382 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 MED11Q9P086 117 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 P2RX2Q9UBL9 471 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SUCOQ9UBS9 1254 aaKnown RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 FBXL2Q9UKC9 423 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 C15orf41Q9Y2V0 281 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 DTNAQ9Y4J8 743 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 NBASA2RRP1 2371 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 DSPPQ9NZW4 1301 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 POLEQ07864 2286 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HEATR5AQ86XA9 2040 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 A0A0G2JPF8 293 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 A0A1B0GVC2 190 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 SERINC4A6NH21 518 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 AGAP5A6NIR3 686 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HNRNPCL2B2RXH8 293 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HNRNPCL3B7ZW38 293 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 SCDO00767 359 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 TFECO14948 347 aaPredicted RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ZNHIT1O43257 154 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HNRNPCL1O60812 293 aaKnown RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 GCM2O75603 506 aaPredicted RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 PDE9AO76083 593 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 PGM3O95394 542 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HPNP05981 417 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 BCHEP06276 602 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HNRNPCL4P0DMR1 293 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 T-ENOLP0DO92 83 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HPGDP15428 266 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 RPS4Y1P22090 263 aaKnown RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 CPA2P48052 419 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 MASP1P48740 699 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 KCNJ10P78508 379 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 CDK6Q00534 326 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 KRT72Q14CN4 511 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF630Q2M218 657 aaPredicted RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 EIPR1Q53HC9 387 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 PDZK1Q5T2W1 519 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 GCNT6Q5T4J0 391 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 PRAMEF8Q5VWM4 474 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 PRAMEF7Q5VXH5 474 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 CBLN3Q6UW01 205 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 TRILQ7L0X0 811 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HMGN2P46Q86SG4 172 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 SERPINA11Q86U17 422 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ZZZ3Q8IYH5 903 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ST6GALNAC3Q8NDV1 305 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 OR8J3Q8NGG0 315 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 OR10A6Q8NH74 314 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 NFKBIDQ8NI38 313 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 OIT3Q8WWZ8 545 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF524Q96C55 264 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 SH3GL1Q99961 368 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 HOPXQ9BPY8 73 aaPredicted RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 TREX2Q9BQ50 279 aaPredicted RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 QRSL1Q9H0R6 528 aaKnown RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 GSX1Q9H4S2 264 aaPredicted RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 CMTM6Q9NX76 183 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 CALML5Q9NZT1 146 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 PPP4R1LQ9P1A2 415 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 SEC14L3Q9UDX4 400 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 TAGLN3Q9UI15 199 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ICAM5Q9UMF0 924 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 USP22Q9UPT9 525 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 CORO2BQ9UQ03 480 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 MRPS18CQ9Y3D5 142 aaKnown RBP6.73□□□□□ -1.33
LINC01049-201ENST00000426840 LIPGQ9Y5X9 500 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 MED12Q93074 2177 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 ESPL1Q14674 2120 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 BOD1L1Q8NFC6 3051 aa6.73□□□□□ -1.33
LINC01049-201ENST00000426840 SMG1Q96Q15 3661 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 TRGV5A0A0B4J1U4 118 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 A0A1B0GTH9 108 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 CLDN24A6NM45 220 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ACOT7O00154 380 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 GTPBP1O00178 669 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 SUSD5O60279 629 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 EIF4E2O60573 245 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 DNAJA2O60884 412 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 BCAS1O75363 584 aaPredicted RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 TRAPPC6AO75865 159 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 DBIP07108 87 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 PLA2G2AP14555 144 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 GDF1P27539 372 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 SRD5A2P31213 254 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 PGM1P36871 562 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 CRISP3P54108 245 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 DSCR4P56555 118 aaPredicted RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 PCBP3P57721 371 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 B3GALT5-AS1P59052 145 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 PSME3P61289 254 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 HSF1Q00613 529 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF117Q03924 483 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 RBBP4Q09028 425 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms