RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SERPINB4P48594 390 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 SERPINB9P50453 376 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF83P51522 516 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 EFNA4P52798 201 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 CHRNEQ04844 493 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 RASGEF1BQ0VAM2 473 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 ARL13AQ5H913 290 aaPredicted RBP12.94□□□□□ -0.34
PDAP1-202ENST00000426447 UBE2J2Q8N2K1 259 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 TMEM151AQ8N4L1 468 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 NUP43Q8NFH3 380 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 FAM110BQ8TC76 370 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 ZFP90Q8TF47 636 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 CHMP6Q96FZ7 201 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 KCNA7Q96RP8 456 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 CXorf36Q9H7Y0 433 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 BCO1Q9HAY6 547 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 MYNNQ9NPC7 610 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 STK38LQ9Y2H1 464 aa12.94□□□□□ -0.34
PDAP1-202ENST00000426447 A0A1W2PQD3 144 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 SLC35F4A4IF30 521 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 CCT8L1PA6NM43 557 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 H7C417 338 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 RGS14O43566 566 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 PGRP06401 933 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 IFI6P09912 130 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 ALOX5P09917 674 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 IMPDH1P20839 514 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 IGHV1-2P23083 117 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 LCN1P31025 176 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 PKNOX1P55347 436 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 RAC3P60763 192 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 CD226Q15762 336 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 ZAR1Q86SH2 424 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 COX18Q8N8Q8 333 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 SLC16A11Q8NCK7 471 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 OR52N5Q8NH56 324 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 C3orf49Q96BT1 292 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 GPC6Q9Y625 555 aaPredicted RBP12.93□□□□□ -0.34
PDAP1-202ENST00000426447 ATP23Q9Y6H3 246 aa12.93□□□□□ -0.34
PDAP1-202ENST00000426447 A0A1W2PNR3 127 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ESYT3A0FGR9 886 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 SERTM1A2A2V5 107 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 POC1B-GALNT4F8VUJ3 575 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 H3BNH8 94 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 M0R1B8 84 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 KIF2AO00139 706 aaPredicted RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 GTPBP1O00178 669 aaKnown RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 PDPK1O15530 556 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 WIPF1O43516 503 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 RAD51DO75771 328 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 PGM3O95394 542 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ACP2P11117 423 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 APEHP13798 732 aaKnown RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 CD40P25942 277 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 MAP3K8P41279 467 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF117Q03924 483 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 SPOCK1Q08629 439 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 LCP2Q13094 533 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 DUSP5Q16690 384 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 CCNJQ5T5M9 372 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF544Q6NX49 715 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 NOXRED1Q6NXP6 359 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 LRIG3Q6UXM1 1119 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 IKBIPQ70UQ0 350 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 MTERF4Q7Z6M4 381 aaKnown RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 GALNT5Q7Z7M9 940 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF433Q8N7K0 673 aaPredicted RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ZFP28Q8NHY6 868 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 FAM76AQ8TAV0 307 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 JADE3Q92613 823 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 HOXB13Q92826 284 aaPredicted RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 MSI2Q96DH6 328 aaKnown RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 OTUB1Q96FW1 271 aaPredicted RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 TMEM237Q96Q45 408 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF300Q96RE9 604 aaPredicted RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 INPP5KQ9BT40 448 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 C12orf65Q9H3J6 166 aaKnown RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 COQ10BQ9H8M1 238 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 EML4Q9HC35 981 aaKnown RBP12.92□□□□□ -0.34
PDAP1-202ENST00000426447 MID1IP1Q9NPA3 183 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 NINJ2Q9NZG7 142 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 CARD8Q9Y2G2 431 aa12.92□□□□□ -0.34
PDAP1-202ENST00000426447 GOLGA8QA0A0J9YX86 632 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 A0A1W2PR80 420 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 GOLGA8OA6NCC3 632 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 GOLGA8NF8WBI6 632 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 GOLGA8RI6L899 631 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 LY6HO94772 140 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 HSPA4LO95757 839 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 TGFAP01135 160 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 IGHV3-9P01782 118 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 COX5AP20674 150 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 ATP6V1C1P21283 382 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms