RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 SLC37A2Q8TED4 501 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 SPRYD4Q8WW59 207 aaPredicted RBP9.91□□□□□ -0.82
CUX1-205ENST00000425244 NR4A3Q92570 626 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 DMRTB1Q96MA1 342 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 WDFY2Q96P53 400 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 ARHGAP9Q9BRR9 750 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 SARGQ9BW04 601 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 DPH1Q9BZG8 443 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 B3GNT4Q9C0J1 378 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 MTHFD2LQ9H903 347 aaPredicted RBP9.91□□□□□ -0.82
CUX1-205ENST00000425244 MED20Q9H944 212 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 FSCN3Q9NQT6 498 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 ZNF221Q9UK13 617 aa9.91□□□□□ -0.82
CUX1-205ENST00000425244 C2orf92A0A1B0GVN3 265 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 OR6C74A6NCV1 312 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 OR5F1O95221 314 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 CPMP14384 443 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 TYRP1P17643 537 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 NT5EP21589 574 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 BLKP51451 505 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 SLC16A1P53985 500 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 DSG2Q14126 1118 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 CEBPEQ15744 281 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 AADACL4Q5VUY2 407 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 HEPHL1Q6MZM0 1159 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 ZNF544Q6NX49 715 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 FIGNL1Q6PIW4 674 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 PRSS41Q7RTY9 318 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 MRGPREQ86SM8 312 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 KLBQ86Z14 1044 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 UBQLNLQ8IYU4 475 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 KLHL36Q8N4N3 616 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 ATP6V1C2Q8NEY4 427 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 NLGN4YQ8NFZ3 816 aaPredicted RBP9.9□□□□□ -0.82
CUX1-205ENST00000425244 AP3S1Q92572 193 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 EDAQ92838 391 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 NEK6Q9HC98 313 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
CUX1-205ENST00000425244 MRPS18AQ9NVS2 196 aaKnown RBP9.9□□□□□ -0.82
CUX1-205ENST00000425244 FBXO34Q9NWN3 711 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 CPNE7Q9UBL6 633 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 PHF11Q9UIL8 331 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 MRPS2Q9Y399 296 aaKnown RBP9.9□□□□□ -0.82
CUX1-205ENST00000425244 SF3B6Q9Y3B4 125 aaKnown RBP9.9□□□□□ -0.82
CUX1-205ENST00000425244 PCDHGB2Q9Y5G2 931 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 CDH10Q9Y6N8 788 aa9.9□□□□□ -0.82
CUX1-205ENST00000425244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.9□□□□□ -0.83
CUX1-205ENST00000425244 A0A1B0GVT2 93 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 SLC35F4A4IF30 521 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 PEX12O00623 359 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 CDK2AP1O14519 115 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 BCAT2O15382 392 aaPredicted RBP9.9□□□□□ -0.83
CUX1-205ENST00000425244 CSF3P09919 207 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 UGT2B7P16662 529 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 HTR3AP46098 478 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 MAZP56270 477 aaKnown RBP9.9□□□□□ -0.83
CUX1-205ENST00000425244 GPR50Q13585 617 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 MAPK14Q16539 360 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 LPAL2Q16609 132 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 GLYR1Q49A26 553 aaPredicted RBP9.9□□□□□ -0.83
CUX1-205ENST00000425244 KLHL12Q53G59 568 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 SIRT6Q8N6T7 355 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 ZNF614Q8N883 585 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 OR5T3Q8NGG3 340 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 PFN4Q8NHR9 129 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 GPBAR1Q8TDU6 330 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 ZDHHC1Q8WTX9 485 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 OR2A5Q96R48 311 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 ANKRD19PQ9H560 264 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 IL20Q9NYY1 176 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 NLGN3Q9NZ94 848 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 KCMF1Q9P0J7 381 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 TNFRSF10DQ9UBN6 386 aa9.9□□□□□ -0.83
CUX1-205ENST00000425244 LRP4O75096 1905 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 A0A1W2PR77 199 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 C10orf142B7Z368 130 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 AKAP8O43823 692 aaKnown RBP9.89□□□□□ -0.83
CUX1-205ENST00000425244 HPGDSO60760 199 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 NDUFS1P28331 727 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 ARFIP1P53367 373 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 RPS7P62081 194 aaKnown RBP9.89□□□□□ -0.83
CUX1-205ENST00000425244 HHEXQ03014 270 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 ATAD3CQ5T2N8 411 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 FCRLBQ6BAA4 426 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 XKRXQ6PP77 449 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 CXXC5Q7LFL8 322 aaKnown RBP9.89□□□□□ -0.83
CUX1-205ENST00000425244 ZNF438Q7Z4V0 828 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 RANBP3LQ86VV4 465 aaPredicted RBP9.89□□□□□ -0.83
CUX1-205ENST00000425244 OR2L13Q8N349 312 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 COX18Q8N8Q8 333 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 POGLUT1Q8NBL1 392 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 NEIL3Q8TAT5 605 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 FANK1Q8TC84 345 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 SLC22A18Q96BI1 424 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 ZNF486Q96H40 463 aaPredicted RBP9.89□□□□□ -0.83
CUX1-205ENST00000425244 SERINC2Q96SA4 455 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 SDF2Q99470 211 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 SLC22A4Q9H015 551 aa9.89□□□□□ -0.83
CUX1-205ENST00000425244 C11orf54Q9H0W9 315 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms