RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RPH3AQ9Y2J0 694 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ZNF264O43296 627 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 IFNW1P05000 195 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 THBS1P07996 1170 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 RAP2AP10114 183 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 MST1P26927 711 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 SLC7A1P30825 629 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 MASP1P48740 699 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 EFR3AQ14156 821 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 TOMM20Q15388 145 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 GEMIN6Q8WXD5 167 aaKnown RBP12.26□□□□□ -0.45
PRPF39-202ENST00000424478 MCHR1Q99705 422 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 POLE3Q9NRF9 147 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-202ENST00000424478 OLAHQ9NV23 265 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 SAC3D1A6NKF1 404 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 TP53I11O14683 189 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 CST1P01037 141 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 ACAA2P42765 397 aaKnown RBP12.25□□□□□ -0.45
PRPF39-202ENST00000424478 IDH2P48735 452 aaKnown RBP12.25□□□□□ -0.45
PRPF39-202ENST00000424478 NRF1Q16656 503 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 ENTPD8Q5MY95 495 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 BORAQ6PGQ7 559 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 DHRS4L2Q6PKH6 230 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 ADAMTS16Q8TE57 1224 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 PAQR8Q8TEZ7 354 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 ARHGDIGQ99819 225 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 IL1RAPQ9NPH3 570 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 PPP4R1LQ9P1A2 415 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 WIF1Q9Y5W5 379 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 OR5H15A6NDH6 313 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 PDLIM1O00151 329 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 GPIP06744 558 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 PRKACGP22612 351 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 RRM2P31350 389 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 CDH12P55289 794 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 MFAP5Q13361 173 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 LPCAT4Q643R3 524 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 RTL4Q6ZR62 310 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 SH2D2AQ9NP31 389 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 TUBA8Q9NY65 449 aaPredicted RBP12.25□□□□□ -0.45
PRPF39-202ENST00000424478 TNFRSF10DQ9UBN6 386 aa12.25□□□□□ -0.45
PRPF39-202ENST00000424478 A0A087WV48 116 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 FAM166BA8MTA8 275 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ATP6V1G2O95670 118 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 P04436 131 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 CRTC2Q53ET0 693 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-202ENST00000424478 RNF220Q5VTB9 566 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 TBPL2Q6SJ96 375 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 APLFQ8IW19 511 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-202ENST00000424478 SULF2Q8IWU5 870 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 SLC15A4Q8N697 577 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ATP6V1C2Q8NEY4 427 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ZNF300Q96RE9 604 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-202ENST00000424478 KLHL28Q9NXS3 571 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 TP53TG5Q9Y2B4 290 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 SLC9A8Q9Y2E8 581 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 KPNA4O00629 521 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-202ENST00000424478 MGRN1O60291 552 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 CELA3AP09093 270 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 LINGO3P0C6S8 592 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ANPEPP15144 967 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 NAGAP17050 411 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 SPIBQ01892 262 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 OR52E4Q8NGH9 312 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 TTC9Q92623 222 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 TMEM185BQ9H7F4 350 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ICAM5Q9UMF0 924 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 A4GNTQ9UNA3 340 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 COL6A6A6NMZ7 2263 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 GNGT2O14610 69 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 IL11P20809 199 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 CASRP41180 1078 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 TAS2R41P59536 307 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 FGD3Q5JSP0 725 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 WDR88Q6ZMY6 472 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 PLEKHM3Q6ZWE6 761 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ERMP1Q7Z2K6 904 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-202ENST00000424478 NKAIN4Q8IVV8 208 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ZNF563Q8TA94 476 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 UBL7Q96S82 380 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-202ENST00000424478 HOXD1Q9GZZ0 328 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 NTN4Q9HB63 628 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 ABI3Q9P2A4 366 aa12.24□□□□□ -0.45
PRPF39-202ENST00000424478 H3BNH8 94 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 SOX30O94993 753 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 SOX8P57073 446 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 OR1Q1Q15612 314 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 CNTNAP3BQ96NU0 1288 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 CNTNAP3Q9BZ76 1288 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 SACM1LQ9NTJ5 587 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 SLC7A7Q9UM01 511 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 ENPP4Q9Y6X5 453 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 TRBV4-1A0A0J9YWV2 114 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 TNFSF10P50591 281 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 MDS2Q8NDY4 140 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 B4GALNT2Q8NHY0 566 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 RASSF5Q8WWW0 418 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms