RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 SLC17A6Q9P2U8 582 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 PCDHB10Q9UN67 800 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 PRSS38A1L453 326 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 OR6C68A6NDL8 312 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 FARS2O95363 451 aaKnown RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 ZNF682O95780 498 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 HOXC4P09017 264 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 PPP2R1BP30154 601 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 HOXA6P31267 233 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 SOAT1P35610 550 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 AFF3P51826 1226 aaKnown RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 NFKB2Q00653 900 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 SKP2Q13309 424 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 MBOAT1Q6ZNC8 495 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 SPRED2Q7Z698 418 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 IQCHQ86VS3 1027 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 MINDY1Q8N5J2 469 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 ZNF283Q8N7M2 679 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 BPIFCQ8NFQ6 507 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 OR5T1Q8NG75 326 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 CD200R1Q8TD46 325 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 ZNF419Q96HQ0 510 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 NXF2Q9GZY0 626 aaKnown RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 MIXL1Q9H2W2 232 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 ASCL3Q9NQ33 180 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 NLGN3Q9NZ94 848 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 MYO16Q9Y6X6 1858 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 UBE2QL1A1L167 161 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 A8MXK9 166 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 DUX1O43812 170 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 LINC00271P0C7V0 271 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 COX7A2P14406 83 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 BUD31P41223 144 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 SSR2P43308 183 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 RAB28P51157 221 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 SLC35A2P78381 396 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 TOMM34Q15785 309 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 TBCEQ15813 527 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 SPIN4Q56A73 249 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 NUDT13Q86X67 352 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 CMIPQ8IY22 773 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 HSPA12BQ96MM6 686 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 CNTNAP3BQ96NU0 1288 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 ENKD1Q9H0I2 346 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 MED9Q9NWA0 146 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 LOC105369274A0A096LPK9 316 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 SDHDO14521 159 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 IFNA2P01563 188 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 TFP02787 698 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 NDUFV2P19404 249 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 AOAHP28039 575 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 CHI3L1P36222 383 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 DLX2Q07687 328 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 ZNF155Q12901 538 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 MPPED2Q15777 294 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 LGALSLQ3ZCW2 172 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 RGS7BPQ6MZT1 257 aaPredicted RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 GSG1LQ6UXU4 331 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 OR4N4Q8N0Y3 316 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 BOLLQ8N9W6 283 aaKnown RBP9.18□□□□□ -0.94
USP54-205ENST00000424265 ACVR1CQ8NER5 493 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 BEST4Q8NFU0 473 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 NAT6Q93015 286 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 RSPRY1Q96DX4 576 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 C14orf144Q96I85 54 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 CHRDQ9H2X0 955 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 PELI2Q9HAT8 420 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 NUDT15Q9NV35 164 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 C1orf109Q9NX04 203 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 NDOR1Q9UHB4 597 aa9.18□□□□□ -0.94
USP54-205ENST00000424265 PDCD11Q14690 1871 aaKnown RBP9.17□□□□□ -0.94
USP54-205ENST00000424265 C9JVG2 144 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 FCARP24071 287 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 AVPR1BP47901 424 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 CDKN2DP55273 166 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 RPL38P63173 70 aaKnown RBP9.17□□□□□ -0.94
USP54-205ENST00000424265 ABHD13Q7L211 337 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 SERPINA12Q8IW75 414 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 UCN3Q969E3 161 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 PYCR2Q96C36 320 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 L3HYPDHQ96EM0 354 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 RNFT2Q96EX2 444 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 SMCO4Q9NRQ5 59 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 GLRX2Q9NS18 164 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 POT1Q9NUX5 634 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 PDP1Q9P0J1 537 aaPredicted RBP9.17□□□□□ -0.94
USP54-205ENST00000424265 POMT2Q9UKY4 750 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 IL9P15248 144 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 SERPINF1P36955 418 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 PCBP2Q15366 365 aaKnown RBP eCLIP9.17□□□□□ -0.942e-11■■■■□ 23.5
USP54-205ENST00000424265 NTRK2Q16620 822 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 PRRT3Q5FWE3 981 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 ZNF678Q5SXM1 525 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 PIP5KL1Q5T9C9 394 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 Q7L0L9 218 aa9.17□□□□□ -0.94
USP54-205ENST00000424265 PIANPQ8IYJ0 282 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms