RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 A0A0U1RQV5 110 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ESYT2A0FGR8 921 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 RIPK2O43353 540 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 PEX11AO75192 247 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 SNX4O95219 450 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 GCKP35557 465 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 KIR2DS2P43631 304 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 BDKRB1P46663 353 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ELP6Q0PNE2 266 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 SPP2Q13103 211 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ASPHD2Q6ICH7 369 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 OR8G2PQ6IF36 304 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 SULT1C3Q6IMI6 304 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 TIFABQ6ZNK6 161 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ERASQ7Z444 233 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ALLCQ8N6M5 410 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 BCORP1Q8N888 145 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZSCAN4Q8NAM6 433 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 CNIH3Q8TBE1 160 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 SRSF12Q8WXF0 261 aaKnown RBP2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 RAB7BQ96AH8 199 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 CNDP1Q96KN2 507 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 SMIM14Q96QK8 99 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 MCHR1Q99705 422 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 NXF3Q9H4D5 531 aaKnown RBP2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 RHOJQ9H4E5 214 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 LPAR2Q9HBW0 351 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 SLC35D1Q9NTN3 355 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 RABL2AQ9UBK7 228 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 ANGPTL2Q9UKU9 493 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 MAB21L2Q9Y586 359 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 CUX2O14529 1486 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 MYO10Q9HD67 2058 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 SYNJ2BP-COX16A0A087WUM0 186 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 SMIM28A0A1B0GU29 152 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 ZNF264O43296 627 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 DUX1O43812 170 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 LANCL1O43813 399 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 AKR7A3O95154 331 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 PDHBP11177 359 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 RPS2P15880 293 aaKnown RBP2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 LRRC74AQ0VAA2 488 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 RGS9BPQ6ZS82 235 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 ARMCX2Q7L311 632 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 FAM220AQ7Z4H9 259 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 LHFPL4Q7Z7J7 247 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 RNF175Q8N4F7 328 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 CERS5Q8N5B7 392 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 Q8N9L7 120 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 DCAF4L2Q8NA75 395 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 C20orf203Q8NBC4 194 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 SHC3Q92529 594 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 RDH5Q92781 318 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 VSTM2LQ96N03 204 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 CYP2S1Q96SQ9 504 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 EBF4Q9BQW3 602 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 ERP44Q9BS26 406 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 DPH5Q9H2P9 285 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 COQ10BQ9H8M1 238 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 MYOZ2Q9NPC6 264 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 NGBQ9NPG2 151 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 AGPAT5Q9NUQ2 364 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 CD274Q9NZQ7 290 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 NAP1L2Q9ULW6 460 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 AP4B1Q9Y6B7 739 aa2.77□□□□□ -1.97
HMGB1P49-201ENST00000418882 SYNRGQ9UMZ2 1314 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 PSMB11A5LHX3 300 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 FCN1O00602 326 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 SDHDO14521 159 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 ABCD4O14678 606 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 RRASP10301 218 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 HSPA5P11021 654 aaKnown RBP2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 KRT13P13646 458 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 UQCRBP14927 111 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 H2AFXP16104 143 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 ATP5A1P25705 553 aaKnown RBP2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 CTRLP40313 264 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 BTDP43251 543 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 GMFBP60983 142 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 RGS1Q08116 209 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 INAQ16352 499 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 LINC01620Q4KN68 170 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 CEP55Q53EZ4 464 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 TMEM110Q86TL2 294 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 SYVN1Q86TM6 617 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 ZNF100Q8IYN0 542 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 FAM133AQ8N9E0 248 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR52B4Q8NGK2 314 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 NANPQ8TBE9 248 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 SLC5A11Q8WWX8 675 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 TMEM101Q96IK0 257 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 CELF6Q96J87 481 aaKnown RBP2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 KCNK16Q96T55 309 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 FEM1AQ9BSK4 669 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 TBCDQ9BTW9 1192 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 NT5C3AQ9H0P0 336 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 PPDPFQ9H3Y8 114 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms