RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ADH6P28332 368 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 CCR4P51679 360 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 SF3A3Q12874 501 aaKnown RBP eCLIP16.26■□□□□ 0.195e-8■□□□□ 9.3
SEMA3B-201ENST00000416295 HSPB2Q16082 182 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 CHMP1BQ7LBR1 199 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 MSRB3Q8IXL7 192 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 PEX5LQ8IYB4 626 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 UBQLNLQ8IYU4 475 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 FAM71CQ8NEG0 241 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 SLC38A5Q8WUX1 472 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 RNF145Q96MT1 663 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 UCN2Q96RP3 112 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 QRSL1Q9H0R6 528 aaKnown RBP16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 RUBCNLQ9H714 662 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 CACYBPQ9HB71 228 aaKnown RBP16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 A4GALTQ9NPC4 353 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 SAR1AQ9NR31 198 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 GPC6Q9Y625 555 aaPredicted RBP16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 A0A0G2JNJ9 132 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 MBD3L4A6NDZ8 208 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 MBD3L3A6NE82 208 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 MBD3L5A6NJ08 208 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 CLCA1A8K7I4 914 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 SHISA8B8ZZ34 492 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 CYP7B1O75881 506 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 IL2RAP01589 272 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 DBIP07108 87 aaKnown RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 UBTFL6P0CB48 400 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 CD1EP15812 388 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 RPS4Y1P22090 263 aaKnown RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 ELK4P28324 431 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 HTR1EP28566 365 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 ADSLP30566 484 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 KCNJ10P78508 379 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 MAPRE2Q15555 327 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 ZNF787Q6DD87 383 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 DLEU7Q6UYE1 221 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 SEM1Q6ZVN7 128 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 ADGRE4PQ86SQ3 457 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 DHDDSQ86SQ9 333 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 CCDC71Q8IV32 467 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 LILRB4Q8NHJ6 448 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 MBD3L2Q8NHZ7 208 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 GPR119Q8TDV5 335 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 WDR60Q8WVS4 1066 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 C10orf82Q8WW14 230 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 SMPDL3BQ92485 455 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 ZG16BQ96DA0 208 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 TM9SF2Q99805 663 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 TREX2Q9BQ50 279 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 NSRP1Q9H0G5 558 aaKnown RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 CHST11Q9NPF2 352 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 EXOSC3Q9NQT5 275 aaKnown RBP16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 Q9UFV3 132 aa16.25■□□□□ 0.19
SEMA3B-201ENST00000416295 PHF3Q92576 2039 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 DSPPQ9NZW4 1301 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 ITPR2Q14571 2701 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 A0A0G2JPF8 293 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 HNRNPCL2B2RXH8 293 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 HNRNPCL3B7ZW38 293 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 SLC22A2O15244 555 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 SEC14L5O43304 696 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 HNRNPCL1O60812 293 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 DNAJA2O60884 412 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 HNRNPCL4P0DMR1 293 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 NID1P14543 1247 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 IL7RP16871 459 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 PGCP20142 388 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 PSMA4P25789 261 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 COL8A1P27658 744 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 CEACAM8P31997 349 aaPredicted RBP16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 PGM1P36871 562 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 RPS3AP61247 264 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 RAC1P63000 192 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 FOXF1Q12946 379 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 KLF10Q13118 480 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 NFYCQ13952 458 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 CDSNQ15517 529 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 MAPK11Q15759 364 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 GCNT6Q5T4J0 391 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 PRAMEF8Q5VWM4 474 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 PRAMEF7Q5VXH5 474 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 METTL25Q8N6Q8 603 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 TNIP2Q8NFZ5 429 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 TMEM234Q8WY98 164 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 WNT2BQ93097 391 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 TMEM19Q96HH6 336 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 MRGPRX4Q96LA9 322 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 KLHDC3Q9BQ90 382 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 THUMPD3Q9BV44 507 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 CLCF1Q9UBD9 225 aa16.24■□□□□ 0.19
SEMA3B-201ENST00000416295 BBIP1A8MTZ0 92 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 KDM4EB2RXH2 506 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 C5orf58C9J3I9 102 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 TOXO94900 526 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 PRKCAP17252 672 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 GPX2P18283 190 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 SLC6A8P48029 635 aa16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 SUCLG1P53597 346 aaKnown RBP16.23■□□□□ 0.19
SEMA3B-201ENST00000416295 CLDN20P56880 219 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms