RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 SLC38A2Q96QD8 506 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 SLX1AQ9BQ83 275 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 NDC1Q9BTX1 674 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 FNDC11Q9BVV2 318 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 GTPBP2Q9BX10 602 aaKnown RBP10.74□□□□□ -0.69
RFFL-205ENST00000415395 NDEL1Q9GZM8 345 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 TRIM45Q9H8W5 580 aaPredicted RBP10.74□□□□□ -0.69
RFFL-205ENST00000415395 BCL2L10Q9HD36 194 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 CALML5Q9NZT1 146 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 RHCGQ9UBD6 479 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 TRPC4Q9UBN4 977 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 MMACHCQ9Y4U1 282 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 SPTBP11277 2137 aa10.74□□□□□ -0.69
RFFL-205ENST00000415395 TMEM129A0AVI4 362 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 FAM227AF5H4B4 570 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 SEC14L5O43304 696 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 ARHGEF9O43307 516 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 LDB3O75112 727 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 CDRT1O95170 752 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 GP1BAP07359 652 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 OR12D1P0DN82 309 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 MAN2A2P49641 1150 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 PRKAG1P54619 331 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 TARDBPQ13148 414 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFFL-205ENST00000415395 TRA2AQ13595 282 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFFL-205ENST00000415395 SERTAD2Q14140 314 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 PUM1Q14671 1186 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFFL-205ENST00000415395 LTB4RQ15722 352 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 DUSP7Q16829 419 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 PRICKLE4Q2TBC4 344 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 TBRG1Q3YBR2 411 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 FHL5Q5TD97 284 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 MFSD12Q6NUT3 480 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 MZT2AQ6P582 158 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 ZNF574Q6ZN55 896 aaPredicted RBP10.73□□□□□ -0.69
RFFL-205ENST00000415395 BPHLQ86WA6 291 aaPredicted RBP10.73□□□□□ -0.69
RFFL-205ENST00000415395 OR4N5Q8IXE1 308 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 PEX5LQ8IYB4 626 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 TCEANCQ8N8B7 351 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 OR7G2Q8NG99 324 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 OR51Q1Q8NH59 317 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 KAT2AQ92830 837 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 CTHRC1Q96CG8 243 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 PEX11GQ96HA9 241 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 DIRAS2Q96HU8 199 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 FRMD6Q96NE9 622 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 ARRDC1-AS1Q9H2J1 176 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 PRTFDC1Q9NRG1 225 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 FGF21Q9NSA1 209 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 TXNL4BQ9NX01 149 aaKnown RBP10.73□□□□□ -0.69
RFFL-205ENST00000415395 HCN3Q9P1Z3 774 aa10.73□□□□□ -0.69
RFFL-205ENST00000415395 A0A0G2JPF8 293 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 A0A1B0GX78 115 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 A0A1W2PQ09 198 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 A8MU76 341 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 HNRNPCL2B2RXH8 293 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 HNRNPCL3B7ZW38 293 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 NTN3O00634 580 aaPredicted RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 FFAR1O14842 300 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 FLRT2O43155 660 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 SLC28A2O43868 658 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 ALPPP05187 535 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 HNRNPCL4P0DMR1 293 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 NR2F1P10589 423 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 NT5EP21589 574 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 HLA-DMAP28067 261 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 RCVRNP35243 200 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 RAB25P57735 213 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 MAP4K2Q12851 820 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 DSG2Q14126 1118 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 SEC23BQ15437 767 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 TAB1Q15750 504 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 LPAL2Q16609 132 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 GLYR1Q49A26 553 aaPredicted RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 CYP27C1Q4G0S4 372 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 EXOSC6Q5RKV6 272 aaKnown RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 TRIQKQ629K1 86 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 TCTN3Q6NUS6 607 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 SPATC1Q76KD6 591 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 LAX1Q8IWV1 398 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 RDH10Q8IZV5 341 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 C19orf18Q8NEA5 215 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 OR2I1PQ8NGU4 316 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 TEX47Q8TBZ9 253 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 XAGE5Q8WWM1 108 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 RAB8BQ92930 207 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 RFKQ969G6 155 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 OR7D2Q96RA2 312 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 YIPF2Q9BWQ6 316 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 BARHL1Q9BZE3 327 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 FGF20Q9NP95 211 aaPredicted RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 MRPS18AQ9NVS2 196 aaKnown RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 TVP23BQ9NYZ1 205 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 MAT2BQ9NZL9 334 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 ATXN7L1Q9ULK2 861 aaPredicted RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 RALGAPA1Q6GYQ0 2036 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 CCDC88CQ9P219 2028 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 IGHV5-10-1A0A0J9YXX1 117 aa10.72□□□□□ -0.69
RFFL-205ENST00000415395 CASC3O15234 703 aaKnown RBP10.72□□□□□ -0.69
RFFL-205ENST00000415395 PRODHO43272 600 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms