RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 HMGN4O00479 90 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 FFAR1O14842 300 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 NKX2-8O15522 239 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 EMC8O43402 210 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 PDE9AO76083 593 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 MFN2O95140 757 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 LCKP06239 509 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 GABRB1P18505 474 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 SSTR4P31391 388 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 TGFBR2P37173 567 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 IDH2P48735 452 aaKnown RBP9.18□□□□□ -0.94
DDB1-202ENST00000414411 EMDP50402 254 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 PGDP52209 483 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 SLC26A5P58743 744 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 EXOSC7Q15024 291 aaKnown RBP9.18□□□□□ -0.94
DDB1-202ENST00000414411 MAPK11Q15759 364 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 TBCEQ15813 527 aaPredicted RBP9.18□□□□□ -0.94
DDB1-202ENST00000414411 ZNF770Q6IQ21 691 aaPredicted RBP9.18□□□□□ -0.94
DDB1-202ENST00000414411 Q6ZNX1 250 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 RAB43Q86YS6 212 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 SLC15A4Q8N697 577 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 B3GNT7Q8NFL0 401 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 OR7G1Q8NGA0 311 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 GPR32P1Q8NGA4 272 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 NDNFQ8TB73 568 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 MIPOL1Q8TD10 442 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 SFXN5Q8TD22 340 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 FCGR1BQ92637 280 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 RAB8BQ92930 207 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 CCNL2Q96S94 520 aaPredicted RBP9.18□□□□□ -0.94
DDB1-202ENST00000414411 NUDT9Q9BW91 350 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 OR8D2Q9GZM6 311 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 SERHL2Q9H4I8 314 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 C3orf14Q9HBI5 128 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 ENOPH1Q9UHY7 261 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 ERVK-19Q9WJR5 959 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 CORINQ9Y5Q5 1042 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 NINQ8N4C6 2090 aa9.18□□□□□ -0.94
DDB1-202ENST00000414411 CLCA1A8K7I4 914 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 C1QTNF9BB2RNN3 333 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 J3QRK9 145 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 TAF4O00268 1085 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 DYRK3O43781 588 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 HPP00738 406 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 C1QTNF9P0C862 333 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 MAP3K8P41279 467 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 PRR5P85299 388 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 TP53BP2Q13625 1128 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ATP1A4Q13733 1029 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 COLEC12Q5KU26 742 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 EXOSC6Q5RKV6 272 aaKnown RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 PLAG1Q6DJT9 500 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 LINC00299Q6ZSB3 139 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 SLC44A2Q8IWA5 706 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 TAGAPQ8N103 731 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 DRAXINQ8NBI3 349 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 AQP11Q8NBQ7 271 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 NUP43Q8NFH3 380 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ELP5Q8TE02 316 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 PROX1Q92786 737 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 HOXB13Q92826 284 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 MYDGFQ969H8 173 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 GTPBP3Q969Y2 492 aaKnown RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 MOAP1Q96BY2 351 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ART5Q96L15 291 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ALPK1Q96QP1 1244 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 CNPPD1Q9BV87 410 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 RSPO3Q9BXY4 272 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 OR10A5Q9H207 317 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ZCCHC3Q9NUD5 404 aaKnown RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ZNF226Q9NYT6 803 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 LUZP4Q9P127 313 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 RHCGQ9UBD6 479 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ZNF223Q9UK11 482 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 FBXL4Q9UKA2 621 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 CACNA1GO43497 2377 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 NSG1A0A0A6YYJ2 146 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 CLDN24A6NM45 220 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 MAGEB3O15480 346 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 PFDN1O60925 122 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 SEMA7AO75326 666 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 NME6O75414 186 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 HMGN2P05204 90 aaKnown RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 CDK1P06493 297 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 POU2F1P14859 743 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 CD36P16671 472 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 C21orf33P30042 268 aaPredicted RBP9.17□□□□□ -0.94
DDB1-202ENST00000414411 OPRL1P41146 370 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 MAN2A2P49641 1150 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 VBP1P61758 197 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 Q0VFX4 171 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 EXT1Q16394 746 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 ATP1A1-AS1Q5TC04 95 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 BHLHB9Q6PI77 547 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 KLHL17Q6TDP4 642 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 UNQ6494/PRO21346Q6UXR6 183 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 SPACA3Q8IXA5 215 aa9.17□□□□□ -0.94
DDB1-202ENST00000414411 OR52R1Q8NGF1 315 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms