RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 KIR2DL4Q99706 377 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 C19orf24Q9BVV8 132 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 TM2D1Q9BX74 207 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 TRPV5Q9NQA5 729 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 EHFQ9NZC4 300 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 NINJ2Q9NZG7 142 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 P2RX2Q9UBL9 471 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 APOBEC3BQ9UH17 382 aaKnown RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 USP16Q9Y5T5 823 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 ATRNO75882 1429 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 RFX7Q2KHR2 1363 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 RPAP1Q9BWH6 1393 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 PDXKO00764 312 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 CDX4O14627 284 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 TNFSF11O14788 317 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 HAT1O14929 419 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 LATO43561 262 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 IGFBP1P08833 259 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 EIF2S2P20042 333 aaKnown RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 HSPA1LP34931 641 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 ACVR1BP36896 505 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 ASMTP46597 345 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 RGRP47804 291 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC26A5P58743 744 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 NDPQ00604 133 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 SERTAD2Q14140 314 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 CDKN3Q16667 212 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 CYP51A1Q16850 503 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 ISXQ2M1V0 245 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 DCST2Q5T1A1 773 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 STAC2Q6ZMT1 411 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 RBM43Q6ZSC3 357 aaKnown RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 PPP1R42Q7Z4L9 355 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZNF619Q8N2I2 560 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 OR8H1Q8NGG4 311 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 C18orf25Q96B23 403 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 HSD3B7Q9H2F3 369 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 RPAP3Q9H6T3 665 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 MIEF1Q9NQG6 463 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 GDAP2Q9NXN4 497 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC2A6Q9UGQ3 507 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 CLEC4EQ9ULY5 219 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 DUSP12Q9UNI6 340 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 PIN4Q9Y237 131 aaKnown RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 EIF3LQ9Y262 564 aaKnown RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZNF256Q9Y2P7 627 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 PALLDQ8WX93 1383 aa2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
HMGB1P11-201ENST00000413899 UBN2Q6ZU65 1347 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 RAD50Q92878 1312 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 SCN9AQ15858 1988 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 IGLV8-61A0A075B6I0 122 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 EPOPA6NHQ4 379 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 H0YL77 283 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 LGALS8O00214 317 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 RASGRF2O14827 1237 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 PPIHO43447 177 aaKnown RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 TGFAP01135 160 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 JCHAINP01591 159 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 UBTFL1P0CB47 393 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 MX1P20591 662 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 CHMLP26374 656 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 PRR4Q16378 134 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 CDC37Q16543 378 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 SBK1Q52WX2 424 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 TOR1AIP1Q5JTV8 583 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 C9orf129Q5T035 196 aaKnown RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 METTL11BQ5VVY1 283 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 ZNF57Q68EA5 555 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 UFSP1Q6NVU6 142 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 TMEM184AQ6ZMB5 413 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 COPS6Q7L5N1 327 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 CERS5Q8N5B7 392 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 CNNM3Q8NE01 707 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 ANKRD20A12PQ8NF67 263 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 ADAMTS16Q8TE57 1224 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 B3GALT6Q96L58 329 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 FAM111AQ96PZ2 611 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 KCNK16Q96T55 309 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 CHMP4BQ9H444 224 aaKnown RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 KAT8Q9H7Z6 458 aaKnown RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 ZNF702PQ9H963 129 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 ROPN1Q9HAT0 212 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 HYPKQ9NX55 129 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 TMEM9Q9P0T7 183 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 KLHL21Q9UJP4 597 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 CA5BQ9Y2D0 317 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 FLVCR1Q9Y5Y0 555 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 ABCC12Q96J65 1359 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 FER1L6Q2WGJ9 1857 aa2.71□□□□□ -1.98
HMGB1P11-201ENST00000413899 TTC41PQ6P2S7 1318 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 CDHR2Q9BYE9 1310 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 PAPPA2Q9BXP8 1791 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 HMMRO75330 724 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 SERF1AO75920 110 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 LYPD3O95274 346 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 DNAJB1P25685 340 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 CDH5P33151 784 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 HTR5AP47898 357 aa2.7□□□□□ -1.98
HMGB1P11-201ENST00000413899 OVGP1Q12889 678 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms