RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CENPOQ9BU64 300 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 A6NL46 340 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 AMY2AP04746 511 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 BDKRB2P30411 391 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 EIF2DP41214 584 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 CDK3Q00526 305 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 DLX2Q07687 328 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 NAXEQ8NCW5 288 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC25A44Q96H78 314 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 C1QTNF2Q9BXJ5 285 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC6A16Q9GZN6 736 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 GDE1Q9NZC3 331 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 K7EPK0 472 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 UBL4AP11441 157 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 RGRP47804 291 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 FAM71E2Q8N5Q1 922 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 TMEM163Q8TC26 289 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 MZB1Q8WU39 189 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 RARRES3Q9UL19 164 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
SMARCA4-202ENST00000413806 A6NIZ1 184 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 RAP1BP61224 184 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 RAP1AP62834 184 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ZNF169Q14929 603 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 FAM69AQ5T7M9 428 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ACOT11Q8WXI4 607 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 CRB3Q9BUF7 120 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 NIT2Q9NQR4 276 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ACSS1Q9NUB1 689 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 A0A0U1RQS6 177 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ALPLP05186 524 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 C1SP09871 688 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 JMJD7P0C870 316 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 CRABP1P29762 137 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ZNF705AQ6ZN79 300 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 OR1F2PQ96R84 312 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 NELFAQ9H3P2 528 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 HMGN2P05204 90 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SOX3P41225 446 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ZNF417Q8TAU3 575 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 MUL1Q969V5 352 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 KIAA1143Q96AT1 154 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC35A3Q9Y2D2 325 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 PCDHGA6Q9Y5G7 932 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ADAM10O14672 748 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 CTSCP53634 463 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SLC26A5P58743 744 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 C3orf33Q6P1S2 294 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ZNF480Q8WV37 535 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ST8SIA2Q92186 375 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SNX18Q96RF0 628 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 ALOXE3Q9BYJ1 711 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SAP130Q9H0E3 1048 aa12.9□□□□□ -0.34
SMARCA4-202ENST00000413806 SYPP08247 313 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 CDK2P24941 298 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 NUDT1P36639 197 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 ERVFC1P60507 584 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 MLLT11Q13015 90 aaPredicted RBP12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 DOK4Q8TEW6 326 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 PSD2Q9BQI7 771 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 CLSTN3Q9BQT9 956 aa12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 NAA50Q9GZZ1 169 aaKnown RBP12.9□□□□□ -0.35
SMARCA4-202ENST00000413806 FUCA1P04066 466 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 UGT2B7P16662 529 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 GABRB3P28472 473 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 KCNJ5P48544 419 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 NTHL1P78549 312 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 MALLQ13021 153 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 NFATC4Q14934 902 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 NSDHLQ15738 373 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 UEVLDQ8IX04 471 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 OR8J2Q8NGG1 315 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 OR52E1Q8NGJ3 308 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 CWH43Q9H720 699 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 DIRAS3O95661 229 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 CSF1P09603 554 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 CEBPBP17676 345 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 DRD1P21728 446 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 OR2M2Q96R28 347 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 PITX2Q99697 317 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 SHOXO15266 292 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 MMP2P08253 660 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 ARAFP10398 606 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 PPP3CBP16298 524 aa12.89□□□□□ -0.35
SMARCA4-202ENST00000413806 DUSP6Q16828 381 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms