RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 HSP90B2PQ58FF3 399 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 PAGE3Q5JUK9 113 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 PPP4R4Q6NUP7 873 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 CHMP1BQ7LBR1 199 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 MTERF4Q7Z6M4 381 aaKnown RBP11.84□□□□□ -0.51
SSB-203ENST00000413002 GGNQ86UU5 652 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 GRAMD2AQ8IUY3 354 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 MCEMP1Q8IX19 187 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 GTPBP8Q8N3Z3 284 aaPredicted RBP11.84□□□□□ -0.51
SSB-203ENST00000413002 ATP6V1C2Q8NEY4 427 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 GPR119Q8TDV5 335 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 SPDL1Q96EA4 605 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 THUMPD3Q9BV44 507 aaKnown RBP11.84□□□□□ -0.51
SSB-203ENST00000413002 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 RUBCNLQ9H714 662 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 FGFR1OP2Q9NVK5 253 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 PCDHB14Q9Y5E9 798 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 TEX15Q9BXT5 2789 aa11.84□□□□□ -0.51
SSB-203ENST00000413002 CACNA1CQ13936 2221 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 A0A087WZY1 265 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 DVL2O14641 736 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 VIMP08670 466 aaKnown RBP11.83□□□□□ -0.52
SSB-203ENST00000413002 NUDT7P0C024 238 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 TMIGD3P0DMS9 266 aaPredicted RBP11.83□□□□□ -0.52
SSB-203ENST00000413002 NR2F1P10589 423 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 SHC1P29353 583 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 RYKP34925 604 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 SFTPDP35247 375 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 EIF1AXP47813 144 aaKnown RBP11.83□□□□□ -0.52
SSB-203ENST00000413002 MRPL19P49406 292 aaKnown RBP11.83□□□□□ -0.52
SSB-203ENST00000413002 DLX5P56178 289 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 HPCAP84074 193 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 SKP2Q13309 424 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 SQLEQ14534 574 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 RPS26P11Q5JNZ5 115 aaPredicted RBP11.83□□□□□ -0.52
SSB-203ENST00000413002 CGB2Q6NT52 195 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 MSANTD1Q6ZTZ1 278 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 P4HA3Q7Z4N8 544 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 ZNF619Q8N2I2 560 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 OR5W2Q8NH69 310 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 FNDC9Q8TBE3 224 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 WNT2BQ93097 391 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 ZBTB8AQ96BR9 441 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 TMEM120AQ9BXJ8 343 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 SAP130Q9H0E3 1048 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 SLC25A37Q9NYZ2 338 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 AP4B1Q9Y6B7 739 aa11.83□□□□□ -0.52
SSB-203ENST00000413002 ABCA12Q86UK0 2595 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 DCHS2Q6V1P9 2916 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 A0A0J9YW62 118 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 SLC22A20A6NK97 555 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 EEF1E1-BLOC1S5C9J1V9 151 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 CLIC1O00299 241 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 TNFSF11O14788 317 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 EEF1E1O43324 174 aaKnown RBP11.82□□□□□ -0.52
SSB-203ENST00000413002 EIF4E2O60573 245 aaKnown RBP11.82□□□□□ -0.52
SSB-203ENST00000413002 ZCCHC18P0CG32 403 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 ZNF17P17021 662 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 PRKCAP17252 672 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 CTSSP25774 331 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 UQCRC1P31930 480 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 SLC6A8P48029 635 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 ATP4BP51164 291 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 DSTNP60981 165 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 PLAURQ03405 335 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 FGFBP1Q14512 234 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 PON3Q15166 354 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 QPRTQ15274 297 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 SGCBQ16585 318 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 SLC25A35Q3KQZ1 300 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
SSB-203ENST00000413002 ZNF295-AS1Q8N0V1 137 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 LILRA2Q8N149 483 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 C10orf111Q8N326 155 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 CNOT9Q92600 299 aaKnown RBP11.82□□□□□ -0.52
SSB-203ENST00000413002 MAL2Q969L2 176 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 TRNT1Q96Q11 434 aaKnown RBP11.82□□□□□ -0.52
SSB-203ENST00000413002 TM9SF2Q99805 663 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 TRIM8Q9BZR9 551 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 LAT2Q9GZY6 243 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 ENKD1Q9H0I2 346 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 POLE3Q9NRF9 147 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 FBN2P35556 2912 aa11.82□□□□□ -0.52
SSB-203ENST00000413002 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 A0A096LPI6 279 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 LINC01387J3KSC0 135 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 CXCL13O43927 109 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 ADAM11O75078 769 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 AQP8O94778 261 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 RCBTB2O95199 551 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 BCHEP06276 602 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 HOXB9P17482 250 aaPredicted RBP11.81□□□□□ -0.52
SSB-203ENST00000413002 PGM1P36871 562 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 ANXA11P50995 505 aaKnown RBP11.81□□□□□ -0.52
SSB-203ENST00000413002 RAC1P63000 192 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 SIRPAP78324 504 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms