RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 LINC01387J3KSC0 135 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 TOXO94900 526 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 CLDN1O95832 211 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 CSTAP01040 98 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 HOXD4P09016 255 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 PTGER4P35408 488 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 CRISP3P54108 245 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 DLX5P56178 289 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 KCNJ10P78508 379 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 NFYCQ13952 458 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 CAPRIN1Q14444 709 aaKnown RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 MAPRE2Q15555 327 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 BCL2A1Q16548 175 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 SLC25A53Q5H9E4 307 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 PRAMEF8Q5VWM4 474 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 PRAMEF7Q5VXH5 474 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 AAGABQ6PD74 315 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 ENPP6Q6UWR7 440 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 B3GNT6Q6ZMB0 384 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 EIF3MQ7L2H7 374 aaKnown RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 PIGWQ7Z7B1 504 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 MRGPRGQ86SM5 289 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 GGNQ86UU5 652 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 PM20D2Q8IYS1 436 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 EID3Q8N140 333 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 ZNF808Q8N4W9 903 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 OR5W2Q8NH69 310 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 ZPLD1Q8TCW7 415 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 TUBA1CQ9BQE3 449 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 PIGQQ9BRB3 760 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 SLC39A3Q9BRY0 314 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 FAM107BQ9H098 131 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 NSRP1Q9H0G5 558 aaKnown RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 TMEM38AQ9H6F2 299 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 CALML5Q9NZT1 146 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-210ENST00000412342 CAMK2AQ9UQM7 478 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 SLC35A3Q9Y2D2 325 aa11.89□□□□□ -0.51
HDAC8-210ENST00000412342 A0A0G2JPF8 293 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 BBIP1A8MTZ0 92 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 HNRNPCL2B2RXH8 293 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 HNRNPCL3B7ZW38 293 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 H0YC42 278 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 GTPBP1O00178 669 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 EFNA2O43921 213 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 HNRNPCL1O60812 293 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CCDC22O60826 627 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 EPPINO95925 133 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 HNRNPCL4P0DMR1 293 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 PEPDP12955 493 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 NID1P14543 1247 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 PRKCAP17252 672 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 IL11P20809 199 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 AGAP20933 346 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 GCKP35557 465 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 GZMMP51124 257 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 SUCLG1P53597 346 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CLDN20P56880 219 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 MTPNP58546 118 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 FOXF1Q12946 379 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 GCNT6Q5T4J0 391 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 TMEM211Q6ICI0 200 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 ZNF836Q6ZNA1 936 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 MTDHQ86UE4 582 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 PTOV1Q86YD1 416 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CMIPQ8IY22 773 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 METTL25Q8N6Q8 603 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 WDR60Q8WVS4 1066 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CNOT9Q92600 299 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 RNF145Q96MT1 663 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 UCN2Q96RP3 112 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 DNAJB12Q9NXW2 375 aaKnown RBP11.88□□□□□ -0.51
HDAC8-210ENST00000412342 ALKBH4Q9NXW9 302 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CLCF1Q9UBD9 225 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 CACNA1CQ13936 2221 aa11.88□□□□□ -0.51
HDAC8-210ENST00000412342 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 LOC100653049A0A140TA62 436 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 CDHR4A6H8M9 788 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-210ENST00000412342 CD8B2A6NJW9 211 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 EVPLLA8MZ36 301 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 H3BML4 177 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 MRASO14807 208 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 KRT34O76011 436 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 PGM3O95394 542 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 THBS1P07996 1170 aa11.87□□□□□ -0.51
HDAC8-210ENST00000412342 POU3F2P20265 443 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms