RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PDLIM3Q53GG5 364 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC35D3Q5M8T2 416 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 RBM48Q5RL73 367 aaKnown RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ATF7IP2Q5U623 682 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 LRRC38Q5VT99 294 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ARHGEF16Q5VV41 709 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 LYSMD4Q5XG99 296 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PDPK2PQ6A1A2 396 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TIGD3Q6B0B8 471 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PM20D1Q6GTS8 502 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 LAMTOR1Q6IAA8 161 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 LAIR2Q6ISS4 152 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FAM166AQ6J272 317 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF544Q6NX49 715 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FAAP20Q6NZ36 180 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PNCKQ6P2M8 343 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF790Q6PG37 636 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TTC33Q6PID6 262 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 XKRXQ6PP77 449 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ABRAXAS1Q6UWZ7 409 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 METTL7BQ6UX53 244 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TFAP2EQ6VUC0 442 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 HACD2Q6Y1H2 254 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 MACC1Q6ZN28 852 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ANKRD33Q7Z3H0 272 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 HDDC2Q7Z4H3 204 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PRSS42Q7Z5A4 293 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 RTN4RL2Q86UN3 420 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC26A11Q86WA9 606 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PLCZ1Q86YW0 608 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SNX29P2Q8IUI4 249 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CDH26Q8IXH8 852 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 C12orf56Q8IXR9 622 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FAM71AQ8IYT1 594 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TCTE3Q8IZS6 198 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF786Q8N393 782 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CADM2Q8N3J6 435 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SFRP1Q8N474 314 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 DNAJC22Q8N4W6 341 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CCDC185Q8N715 623 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 AMER3Q8N944 861 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FNDC5Q8NAU1 212 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 LEMD2Q8NC56 503 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR52H1Q8NGJ2 320 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR10Q1Q8NGQ4 319 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF564Q8TBZ8 553 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ENKURQ8TC29 256 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FANK1Q8TC84 345 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PHOSPHO2Q8TCD6 241 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZFAND1Q8TCF1 268 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 BLOC1S5Q8TDH9 187 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 PIK3R3Q92569 461 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SEPT8Q92599 483 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 RPL3LQ92901 407 aaKnown RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 NCLNQ969V3 563 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CIDECQ96AQ7 238 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 C18orf25Q96B23 403 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 MAGED4Q96JG8 741 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC45A3Q96JT2 553 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 MBOAT7Q96N66 472 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CPXM1Q96SM3 734 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SDHCQ99643 169 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 MAP3K3Q99759 626 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 RHNO1Q9BSD3 238 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 URM1Q9BTM9 101 aaKnown RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ACAT2Q9BWD1 397 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FUNDC2Q9BWH2 189 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 IDI2Q9BXS1 227 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FTHL17Q9BXU8 183 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FRMD8P1Q9BZ68 369 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SDCBP2Q9H190 292 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TRPV6Q9H1D0 765 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CPVLQ9H3G5 476 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 NIPAL2Q9H841 368 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 UCK1Q9HA47 277 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 AGPAT4Q9NRZ5 378 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 C20orf96Q9NUD7 363 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ADPRHL2Q9NX46 363 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC39A1Q9NY26 324 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 GLTPQ9NZD2 209 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 IL37Q9NZH6 218 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 FLRT3Q9NZU0 649 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 CNIH4Q9P003 139 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 GCNT4Q9P109 453 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ENOPH1Q9UHY7 261 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 MAD2L2Q9UI95 211 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF221Q9UK13 617 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 GMEB2Q9UKD1 530 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 STUB1Q9UNE7 303 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 NIP7Q9Y221 180 aaKnown RBP eCLIP2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TRAPPC4Q9Y296 219 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF175Q9Y473 711 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 SNX5Q9Y5X3 404 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TEX264Q9Y6I9 313 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 MYH11P35749 1972 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 TANC1Q9C0D5 1861 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ARFGEF2Q9Y6D5 1785 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 UBE4BO95155 1302 aa2.15□□□□□ -2.07
HMGB3P2-201ENST00000411913 ARAP2Q8WZ64 1704 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms