RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TUBGCP2Q9BSJ2 902 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 RPP25Q9BUL9 199 aaKnown RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 APOOQ9BUR5 198 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 RGCCQ9H4X1 137 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 NARFLQ9H6Q4 476 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 SUDS3Q9H7L9 328 aaPredicted RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 AGPAT3Q9NRZ7 376 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 KLK11Q9UBX7 282 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ANAPC7Q9UJX3 599 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 TBC1D24Q9ULP9 559 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ABCG2Q9UNQ0 655 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 EXOGQ9Y2C4 368 aaKnown RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 SLC9A8Q9Y2E8 581 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 POLDIP2Q9Y2S7 368 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 MEMO1Q9Y316 297 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 TIMM10BQ9Y5J6 103 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 UHRF1BP1Q6BDS2 1440 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 KIF27Q86VH2 1401 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 AFF2P51816 1311 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 CNTNAP2Q9UHC6 1331 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 CEP350Q5VT06 3117 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 RIMS1Q86UR5 1692 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 A0A0J9YVX5 310 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 LOC390937A0A1W2PQ73 354 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MEX3AA1L020 520 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MPTX1A8MV57 137 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 ZNF701M0R085 212 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 LSM1O15116 133 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 CETN3O15182 167 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 STX11O75558 287 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 NXPH4O95158 308 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 CLDN9O95484 217 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 ECDO95905 644 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 ADORA3P0DMS8 318 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MCF2P10911 925 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 H2AFXP16104 143 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 TNNI1P19237 187 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 PGCP20142 388 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MSR1P21757 451 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 PRKACBP22694 351 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 OTX1P32242 354 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 UGT1A5P35504 534 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 STARP49675 285 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 EFNB2P52799 333 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 ATP1B3P54709 279 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 GSCP56915 257 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 ABCE1P61221 599 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 ITPK1Q13572 414 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MICBQ29980 383 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 FAM74A3Q4VXF1 159 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 PLCXD3Q63HM9 321 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 TMEM53Q6P2H8 277 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 Q6ZTC4 211 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 LANCL3Q6ZV70 420 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 DHDDSQ86SQ9 333 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 ICA1LQ8NDH6 482 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 NUP37Q8NFH4 326 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 OR13F1Q8NGS4 319 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 FBXO25Q8TCJ0 367 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MITD1Q8WV92 249 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 DLX4Q92988 240 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 ART4Q93070 314 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 C18orf25Q96B23 403 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 TMIGD2Q96BF3 282 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 SGK3Q96BR1 496 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 EFHD2Q96C19 240 aaPredicted RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 SLC38A2Q96QD8 506 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MTMR9Q96QG7 549 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 FEM1AQ9BSK4 669 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 COMMD4Q9H0A8 199 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 DUS2Q9NX74 493 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 MRPL39Q9NYK5 338 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 CYTH4Q9UIA0 394 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 MRPS18CQ9Y3D5 142 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
LSM5-206ENST00000409987 RNF215Q9Y6U7 377 aa4.27□□□□□ -1.73
LSM5-206ENST00000409987 CUL7Q14999 1698 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.26□□□□□ -1.73
LSM5-206ENST00000409987 LOC100506127A0A0U1RQW1 187 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 SMCO3A2RU48 225 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 ZNF840PA6NDX5 716 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 GABRR3A8MPY1 467 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 HAS3O00219 553 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 EI24O14681 340 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 CASKO14936 926 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 YKT6O15498 198 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 TNFSF12O43508 249 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 SRPX2O60687 465 aaPredicted RBP4.26□□□□□ -1.73
LSM5-206ENST00000409987 LRATO95237 230 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 H2BFMP0C1H6 154 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 ATP1B2P14415 290 aaPredicted RBP4.26□□□□□ -1.73
LSM5-206ENST00000409987 SRMP19623 302 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 AOC1P19801 751 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 MMP11P24347 488 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 U2AF2P26368 475 aaKnown RBP eCLIP4.26□□□□□ -1.73
LSM5-206ENST00000409987 CRYBB2P43320 205 aa4.26□□□□□ -1.73
LSM5-206ENST00000409987 P2RY1P47900 373 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms