RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 OR1Q1Q15612 314 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RBM48Q5RL73 367 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 TUBA3EQ6PEY2 450 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 PAPD4Q6PIY7 484 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RAB11FIP2Q7L804 512 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF550Q7Z398 422 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZER1Q7Z7L7 766 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 POGLUT1Q8NBL1 392 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 WDR36Q8NI36 951 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RNF138Q8WVD3 245 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 EFHD2Q96C19 240 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 APOL4Q9BPW4 351 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF426Q9BUY5 554 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 UCK2Q9BZX2 261 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 WDR70Q9NW82 654 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 FLRT3Q9NZU0 649 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GPN3Q9UHW5 284 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GMPPBQ9Y5P6 360 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CCDC187A0A096LP49 1063 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 IGHV3-20A0A0C4DH32 117 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM200CA6NKL6 621 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 C9J4A7 227 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ADAM10O14672 748 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 PRKNO60260 465 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 OR10H3O60404 316 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 UTS2O95399 124 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 NADKO95544 446 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 MT-CO3P00414 261 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CD63P08962 238 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RAB40ALP0C0E4 278 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GKN3PP0CG01 181 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CYP4B1P13584 511 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GABRB1P18505 474 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 BTF3P20290 206 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ABCD3P28288 659 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 OMPP47874 163 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CRISP1P54107 249 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GABARAPL2P60520 117 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CXCR4P61073 352 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 MAD2L1BPQ15013 274 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 PCOLCEQ15113 449 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 LINC00114Q6XXX2 140 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 MBOAT2Q6ZWT7 520 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 NKAIN4Q8IVV8 208 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF440Q8IYI8 595 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF786Q8N393 782 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF527Q8NB42 609 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GALNT6Q8NCL4 622 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 OR2Y1Q8NGV0 311 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 MR1Q95460 341 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GTPBP3Q969Y2 492 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 DEPDC7Q96QD5 511 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 LPAR4Q99677 370 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 LRFN3Q9BTN0 628 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 COL25A1Q9BXS0 654 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 B3GNT4Q9C0J1 378 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF700Q9H0M5 742 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CTPS2Q9NRF8 586 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 NCDNQ9UBB6 729 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 SLC7A7Q9UM01 511 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 IGHV1-45A0A0A0MS14 117 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 PMS2P1A4D2B8 440 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 OR6C70A6NIJ9 312 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 C9orf172C9J069 976 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CHP2O43745 196 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 STK17BO94768 372 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 HOXB1P14653 301 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GSTM3P21266 225 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CHMP24386 653 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CRHBPP24387 322 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ELK4P28324 431 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RFX3P48380 749 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 HLCSP50747 726 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 NR0B1P51843 470 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 LSM11P83369 360 aaKnown RBP eCLIP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 IL1RL1Q01638 556 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 MRPL28Q13084 256 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 SKP2Q13309 424 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 CDK5R2Q13319 367 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 TOP3AQ13472 1001 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 C6orf141Q5SZD1 244 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 HLA-DQA1Q5Y7H0 255 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 FAM199XQ6PEV8 388 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 HSDL2Q6YN16 418 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 WDR88Q6ZMY6 472 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ENTHD1Q8IYW4 607 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 RNF113BQ8IZP6 322 aaKnown RBP5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GNPDA2Q8TDQ7 276 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 ELP5Q8TE02 316 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 APH1BQ8WW43 257 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 OMA1Q96E52 524 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GAL3ST4Q96RP7 486 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 GPA33Q99795 319 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 TRIM2Q9C040 744 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 C12orf10Q9HB07 376 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 PCNX3Q9H6A9 2034 aa5.07□□□□□ -1.6
EPHA4-202ENST00000409854 WDR87Q6ZQQ6 2873 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 A0A0B4J203 849 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TEX51A0A1B0GUA7 166 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ALG1L2C9J202 215 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms